Gene Information

Name : Calkr_2266 (Calkr_2266)
Accession : YP_004027340.1
Strain : Caldicellulosiruptor kristjanssonii 177R1B
Genome accession: NC_014721
Putative virulence/resistance : Unknown
Product : transposase, is605 orfb family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0675
EC number : -
Position : 2328335 - 2329426 bp
Length : 1092 bp
Strand : -
Note : KEGG: cdl:CDR20291_2716 transposase-like protein B; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB

DNA sequence :
ATGCAAAAAGCATTTAAATTTAGGATTTATCCTAACAAAAAGCAAATAGAGCTTATAAAGAACACCTTTGGTTGTGTTAG
ATTTGTGTATAACTACTATCTTGCCAAAAGAGAAGAGGAATATAAAACTAATGGAGTAACGTTTAATTATAACAAATGTT
CTGCAGATTTAACTAAACAAAAACAAGTTAATACGTGGTTAAAAGAAGTAGATAAGTTTGCACTTCAGAATGCATTAAAA
GATTTAGATAAAGCATTTAAAAACTTTTTTGAAGGCAGAGCAAATTATCCAAAGTTTAAGTCAAAGAAAAATAAACATCA
AAGTTTTAGAACCAATTTTTCTAATAATAACATCAAAATAGAGGGTAACAAAATAAAACTACCAAAATTGGGTTGGGTAA
AATTTGCAAAGTCAAGGGAAATAGAAGGTAAAATACTAAATGTAACTGTAAGTAGGACACCTACTGGTAAATATTTCATT
TCAATATGCTGTAGTGTAGACAAGATTGAAGAAAAGCCTAAAACCGACAGAGTAATAGGAATAGATTTAGGAATAAATCA
TTTTCTAATAGATAGCGATGGTAACAAAATATCTAATCCTAAATATCTTATAAAGTTAGAAAAAAGGCTTATTAGAGAGC
AAAGAAAGTTGTCAAGGAAACAAATAGGAAGTAACAATTACAAAAAACAAGCTTTGAAAGTGGCAAAGATATATGAGAAG
ATAAGAAACCAGCGGGAAGATTTTTTGCATAAGTTGTCCTCTAAGATTATAAACGAAAACCAAGTTATAATTTTAGAGGA
CTTAAAGGTTAAAAATATGTTGAAGAATGATAGGTTATCGAAGTTCATATCAGACAGTGCATGGGCAAAATTTGTAAAAA
TGCTTGAATACAAAGCTTTTTGGTATGGAAGAGCGATAGTAAAAGTAGATACATTTTATCCATCAAGTCAGATTTGCAGT
GTATGTGGTTATAGAAATGAAGAAGTAAAGGATCTAAAAATAAGAGAATGGAGATGTCCAGAATGCGGAATTGTCCATGA
CAGGGATATAAATGCCAGCATTAATATACTGAAAGAAGGCAAAAAGTTTTAG

Protein sequence :
MQKAFKFRIYPNKKQIELIKNTFGCVRFVYNYYLAKREEEYKTNGVTFNYNKCSADLTKQKQVNTWLKEVDKFALQNALK
DLDKAFKNFFEGRANYPKFKSKKNKHQSFRTNFSNNNIKIEGNKIKLPKLGWVKFAKSREIEGKILNVTVSRTPTGKYFI
SICCSVDKIEEKPKTDRVIGIDLGINHFLIDSDGNKISNPKYLIKLEKRLIREQRKLSRKQIGSNNYKKQALKVAKIYEK
IRNQREDFLHKLSSKIINENQVIILEDLKVKNMLKNDRLSKFISDSAWAKFVKMLEYKAFWYGRAIVKVDTFYPSSQICS
VCGYRNEEVKDLKIREWRCPECGIVHDRDINASINILKEGKKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0626 YP_697953.1 ISCpe2, transposase orfB Not tested Not named Protein 1e-76 51
tnpB AAC44710.2 TnpB Not tested cag PAI Protein 1e-51 41
tnpB AAF80205.1 TnpB Not tested cag PAI Protein 1e-51 41