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Name : Calkr_0143 (Calkr_0143) Accession : YP_004025328.1 Strain : Caldicellulosiruptor kristjanssonii 177R1B Genome accession: NC_014721 Putative virulence/resistance : Unknown Product : alpha amylase catalytic subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 172666 - 174342 bp Length : 1677 bp Strand : - Note : KEGG: ate:Athe_0165 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain DNA sequence : ATGGACTTGCACAAAAAGTGGTGGAAGGAAGCTGTTGTATATCAAATCTATCCTCGAAGCTTTTATGACTCAAACGGTGA TGGAATTGGAGATTTGCCAGGAATAATAGAAAAACTTGATTATCTACAAGAACTTGGAGTGGATGTCATTTGGCTAAATC CTATTTACAAATCTCCAAATGCAGACAACGGCTATGACATCAGCGATTACTATGACATCATGGATGAGTTTGGTACAATG GAAGAATTTGATAGACTCTTGAATGAAGCCCACAAAAGAGGAATTAAAATTGTAATGGACCTTGTTGTGAACCACACATC TGACGAACATAAATGGTTTTTGGAGTCAAGAAAATCAAAAGATAGTCCTTACAGAAACTTTTATTTCTGGCGACCTGGGA AAAACGGTAAGCCTCCTAACAACTGGACATCCTTTTTTGGCGGTCCTGCCTGGGAGTATGACCCACAGACTGGAGAGTAC TATCTACATCTTTTTGCAACAAAGCAGCCCGACCTCAACTGGGACAATCCTCAGGTTCGTCAGGAAGTTTATAAAATGAT GAAGTGGTGGCTTGACAAGGGTATAGACGGTTTTAGAATGGATGTGATAAACCTTATCTCCAAGGTGGAAGGACTACCAG ACGATAGAGAAGGCGAAAAAAAAGGAGGACTTGTTGGTTTTAAATACTATGCAAACGGTCCGCGCGTTCATGAATACCTT CAGGAGATGAACAGAGAAGTCTTGAGCAAATACGACATTATGACAGTAGGTGAAACTCCATTTGTAACTCCTGAGATTGC AAAGCTGTATGTGGAGTATGACAGAAATGAGCTTAATATGCTCTTTCATTTTGAACATATGGACATGGACTGTGAAGGTA GCAAATGGAATGTAAAGCCCTGGAAATTAACTGATTTGAAAAAAATAATGTACAAGTGGTATTTGGCATTGAAAGACAAA GGCTGGAATTCGCTTTACCTTAACAATCACGACCAGCCAAGGATGGTCTCACGTTTTGGCAATGATAAAGAATACAGGGT TGAGTCTGCTAAGCTTTTGGCAACTTTGCTTCACACATGGCAAGGAACTCCTTATATCTACCAAGGCGAAGAGATTGGCA TGACAAACTGCAAGTTTGAAAGTATTGATGAATTCAGAGACATTGAAACACTTAACTTTTACCGTGAAATGAAGGAAAAA GGCATGTCAGATGATAGCATTTTAGAAATTCTGAACAAAAGAAGCAGAGACCATGCAAGAACACCAATGCAATGGGACGA CTCAAATAACGCAGGGTTTACAACAGGAAAGCCGTGGATAAAGGTAAATCCAAATTACAAAGAAATAAATGTGAAGAAGG CTCTTGCTGACAAAGATTCTATCTTTTACTACTACAAAAAACTTATCCAGCTGAGAAAAACACATCCGGCAGTTGTATAT GGTGATGTTCAGATGCTTTATGAAAGTGATGAAAAAATCTTTGCATACACAAGAAGCTATGGAAATGAAAAACTTCTTGT TGTTATGAACTTTTCAGAAGAAGAAGTGGAATTTTGCGCACCAAAAGAAATATTCTCCAATCAACCTGAGCTTTTAATCA GCAATTATGAGGTTGAAGATGATATTCAACAAAAAATTGTTTTAAAACCATATGAGTCGAGGGTATATAAAATATAA Protein sequence : MDLHKKWWKEAVVYQIYPRSFYDSNGDGIGDLPGIIEKLDYLQELGVDVIWLNPIYKSPNADNGYDISDYYDIMDEFGTM EEFDRLLNEAHKRGIKIVMDLVVNHTSDEHKWFLESRKSKDSPYRNFYFWRPGKNGKPPNNWTSFFGGPAWEYDPQTGEY YLHLFATKQPDLNWDNPQVRQEVYKMMKWWLDKGIDGFRMDVINLISKVEGLPDDREGEKKGGLVGFKYYANGPRVHEYL QEMNREVLSKYDIMTVGETPFVTPEIAKLYVEYDRNELNMLFHFEHMDMDCEGSKWNVKPWKLTDLKKIMYKWYLALKDK GWNSLYLNNHDQPRMVSRFGNDKEYRVESAKLLATLLHTWQGTPYIYQGEEIGMTNCKFESIDEFRDIETLNFYREMKEK GMSDDSILEILNKRSRDHARTPMQWDDSNNAGFTTGKPWIKVNPNYKEINVKKALADKDSIFYYYKKLIQLRKTHPAVVY GDVQMLYESDEKIFAYTRSYGNEKLLVVMNFSEEEVEFCAPKEIFSNQPELLISNYEVEDDIQQKIVLKPYESRVYKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-149 | 58 |
