Gene Information

Name : Calkr_0014 (Calkr_0014)
Accession : YP_004025217.1
Strain : Caldicellulosiruptor kristjanssonii 177R1B
Genome accession: NC_014721
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 14322 - 14999 bp
Length : 678 bp
Strand : +
Note : KEGG: ate:Athe_1574 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
GTGATAGAACTTAATGGCGTCTTTAAAATATACAAAATGGGTGAAACAGAGGTTTATGCTTTAAATGGAGTGAGTCTCAA
AATTGATGCACATGAATTTGTTGCGATTATTGGACCTTCTGGTTCAGGAAAATCAACGTTGATGAATATAATAGGATGCC
TTGACACACCAACATCAGGAAAGTACATCTTAGATGGAAAAGAAGTAAGCTGTCTTTCTGACAATCAGCTTGCAGAGATT
AGAAACAACAAAATAGGCTTTGTATTTCAGCAGTTTAATTTAATTCCACAGCTAACTGCCCTTGAGAATGTTGAACTTCC
GCTTATATACAAAGGAGTACCTTCCTCGCAAAGGCACAAGCTTGCAAAAGAAGCGCTTGAAAAAGTTGGGCTTTCAGATA
GAATTCATCACAGACCTAGGCAGCTATCTGGTGGGCAGCAGCAGAGGGTTGCAATTGCAAGAGCACTTGTGACAAATCCA
CCAATAATTTTAGCTGATGAGCCGACAGGAAACTTAGATTCAAAATCTGGTGCAGAGATTATGCAGATTTTTAAACAACT
TCATAGCCATGGCAATACTATAGTGTTAATTACGCATGACAATCACATTGCGTCTCAGGCAAAAAGGATTGTAAAGATTC
AGGATGGGAAAATTGTTGGAGATAGTAAAATTGCATAG

Protein sequence : 
MIELNGVFKIYKMGETEVYALNGVSLKIDAHEFVAIIGPSGSGKSTLMNIIGCLDTPTSGKYILDGKEVSCLSDNQLAEI
RNNKIGFVFQQFNLIPQLTALENVELPLIYKGVPSSQRHKLAKEALEKVGLSDRIHHRPRQLSGGQQQRVAIARALVTNP
PIILADEPTGNLDSKSGAEIMQIFKQLHSHGNTIVLITHDNHIASQAKRIVKIQDGKIVGDSKIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-35 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-35 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-35 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calkr_0014 YP_004025217.1 ABC transporter-like protein NC_012469.1.7686878. Protein 4e-65 60
Calkr_0014 YP_004025217.1 ABC transporter-like protein CP001581.1.gene598.p Protein 5e-43 50
Calkr_0014 YP_004025217.1 ABC transporter-like protein CP001581.1.gene798.p Protein 3e-43 48
Calkr_0014 YP_004025217.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-52 48