Gene Information

Name : Calkr_1205 (Calkr_1205)
Accession : YP_004026326.1
Strain : Caldicellulosiruptor kristjanssonii 177R1B
Genome accession: NC_014721
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase recg
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1259020 - 1261059 bp
Length : 2040 bp
Strand : +
Note : TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: ate:Athe_1224 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase doma

DNA sequence :
ATGAATGTTCTTGAAAAAGACATAAGATTCTTAAAAGGTGTTGGAGAAAACAGAGAAAAGCTATTTAAAAAGCTGGGTAT
AAAAAAAGCCGAGGATTTGCTCTGGCACATACCACGAAAATATCTTGATTATAGTAGGCTAAAGAAAATAAGAGAGCTTT
GCGATGGAGAGATAGAGTCATTTGTTGCAAAGGTTGCTGGCAAGCCTGTGGAGATAGAGACAAGGTCAGTAAAGATAATA
AAAATTCCTGTTGAAGATAGTACAGGCGTTGTTACAACAGTATGGTTTAACCAGGACTATATAAAAAACGTTTTGAAAGA
AGGAGAGATATTCTGCTTTTCTGGGAAGATAGAGAGAAAAGGCTTTTATATTGAGGTCAAAAATCCTGAATTTGAAAAAT
ATGACCAACAACTTCTTCATACAGGCAGGATTGTTCCTGTATACAATTCTACAGAAGGTCTTTCTCAAAAGGTGATTAGA
AATATTGTGAACAATCTTCTGCATCAAGTTGATGGAATGCTTATAGATATAATTCCGCCTTATATAAGACAAAAATATAA
TTTGAGGGATATCAATTTTGCAATAAAAAATATTCATTTTCCAGAAAACAAATTGAGCTTAGAACTTGCAAGGAAAAGGC
TTGTGTTTGAGGAATTTTATCTTCTTCAGCTTTCCCTTTTGCTTTTAAAAGAAAACATAGAAAAAAATGAAGGAATAAAA
ATTGAAAATGCTCAAAGTAGCTTAAAAGAGTTTGAAAAGCTCCTTCCGTTTGAGTTGACCGAGGCACAAAAAAGAGTGCT
GGCAGAGATTGCACAGGATTTAGAAAGTACAAAACAAATGAATAGACTCATCCAAGGCGATGTTGGCTGCGGGAAAACGG
TTGTAGCTTTGGCAAGCGCATATGCAACAATAAAAGCGGGATATCAGGTTGCACTGATGGCACCAACAGAGGTTTTAGCT
TTGCAGCATTATAACGAATGTAAAAAGTACTTTGGTAATAAATTCAATGTAAGACTTCTAATTGGGTCAACTCCAAAAAA
AGAAAAGGAAATAATCTTAAAAGAGCTTGAACATGGACTTTGCAAAATGGTCATTGGAACCCATGCACTTATCCAAGATG
AGGTAAAATTTAAAAACCTTGGCTTGGCAATCACTGATGAACAACACAGATTTGGAGTTATCCAAAGGGTAGAACTCACA
AAAAAAGGAAGTTCACCGAACATTCTTGTTATGACAGCAACTCCAATACCCAGGACGTTGAGTTTGGTTTTGTATGGAGA
CCTTGATATTTCTATTATTGACCAGTTACCTCCCGGCAGAAAAAAGATTTTGACATACGCTGTTGATGAGAGTTTTCGCC
AGCGGGTGTACAATTTCATAAAAAAACAGTTAGATGAGGGGAGACAGGTTTACTGGATATGTCCTCTGATTGAAGAGTCA
GAAACTTTGAATGCAAAATCAGCAGTTGAATTTGCAAAATCTTTGAAAGAAGGATTTTTTAAAGACTACAATGTTGGTTG
CTTACACGGAAAACTTTCTGCAAAAGAGAGAGACAAAATCTTAAATGATTTTAAAGATGGACACATCCATATATTAGTTT
CAACCACAGTTGTTGAGGTTGGAATAAACGTTCCAAATGCCACAGTTATGGTGATTGAGAATGCTGAAAGATTTGGACTT
GCTCAGCTGCATCAGCTAAGGGGGCGAGTTGGCAGAGGCGAGCACCAGTCGTACTGTATTTTGTTTAATCAAAGCGATTC
AGAGATTGCCAAAAAAAGGATGATAGCTATAACCAGAAGTCAGAACGGATTTGAAATTGCTGAAATGGACCTAAAACTCC
GAGGACCTGGTGATTTATTTGGGACAAAACAGCATGGTATCATGAACTTTAAAGTAGCCGATATTATAAATGATATGGAT
ATTTTAAAGCAAGCAAGAATTGCTGCAGAAGAGACGATTAGACTCAAACTTGTTGATAACAAACTTTTAGAAAAAATTAA
CAAACAATTTTACAATAATATAGAAAATATTGGCCTTTAA

Protein sequence :
MNVLEKDIRFLKGVGENREKLFKKLGIKKAEDLLWHIPRKYLDYSRLKKIRELCDGEIESFVAKVAGKPVEIETRSVKII
KIPVEDSTGVVTTVWFNQDYIKNVLKEGEIFCFSGKIERKGFYIEVKNPEFEKYDQQLLHTGRIVPVYNSTEGLSQKVIR
NIVNNLLHQVDGMLIDIIPPYIRQKYNLRDINFAIKNIHFPENKLSLELARKRLVFEEFYLLQLSLLLLKENIEKNEGIK
IENAQSSLKEFEKLLPFELTEAQKRVLAEIAQDLESTKQMNRLIQGDVGCGKTVVALASAYATIKAGYQVALMAPTEVLA
LQHYNECKKYFGNKFNVRLLIGSTPKKEKEIILKELEHGLCKMVIGTHALIQDEVKFKNLGLAITDEQHRFGVIQRVELT
KKGSSPNILVMTATPIPRTLSLVLYGDLDISIIDQLPPGRKKILTYAVDESFRQRVYNFIKKQLDEGRQVYWICPLIEES
ETLNAKSAVEFAKSLKEGFFKDYNVGCLHGKLSAKERDKILNDFKDGHIHILVSTTVVEVGINVPNATVMVIENAERFGL
AQLHQLRGRVGRGEHQSYCILFNQSDSEIAKKRMIAITRSQNGFEIAEMDLKLRGPGDLFGTKQHGIMNFKVADIINDMD
ILKQARIAAEETIRLKLVDNKLLEKINKQFYNNIENIGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 4e-79 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calkr_1205 YP_004026326.1 ATP-dependent DNA helicase recg BAC0356 Protein 4e-90 41