Gene Information

Name : Calkr_1151 (Calkr_1151)
Accession : YP_004026272.1
Strain : Caldicellulosiruptor kristjanssonii 177R1B
Genome accession: NC_014721
Putative virulence/resistance : Unknown
Product : nlpa lipoprotein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1464
EC number : -
Position : 1205551 - 1206408 bp
Length : 858 bp
Strand : +
Note : PFAM: NLPA lipoprotein; KEGG: csc:Csac_1618 NlpA lipoprotein

DNA sequence :
ATGAAAAAATTTGTATCAATTAGGAAGAGAATTTTAATTACGTTTATAATATTTGGTTTTCTAATGACTTCACTTATTGG
ATATGGCGCTAAGCAAGTAAATACTTCAAACAAACAAACACAGAATAATGTGAAGAAAAAAATAACTATAAAAGTTGGTG
CAACACCAGTACCTCATGCAGAAATTTTAAATGTCGTAAAGCCTATTCTTGAGAAAAAAGGTATTATCTTGAATATTGTA
GAATTTACAGATTACGTTCAACCCAACCTTAAATTAGCGGAAAAAGAGCTGGACGCAAATTTCTTTCAACACATTCCTTA
TCTTGAGGATTTTTCAAAAGAACATCGTCTTAATTTGACGTATATTGCTAAGGTGCATATTGAGCCAATGGGAATATATT
CCCAAAAAGTTAAAAAACTTAACCAATTAAAACAAGGGGCTACAATTGCTATACCAAACGATGCTACAAATGGTGGTAGA
GCTTTGCTGCTTTTGCAATCAGCGGGGTTAATAAAACTAAAACCGAATGTTGGTATTAAAGCTAAGGTAAGTGACATTAT
CAAAAATCCTAAAAAAATAAAAATTATTGAACTTGAAGCTGCAACTTTACCAAGAGTGTTACCGGATGTTGATGCAGCAG
TTATAAACACTAATTATGCTTTAGAGGCAAAACTTGTTCCAACAAAAGACGCGCTGTTTATTGAAACTGCTAACTCTCCG
TATGTCAATGTCTTAGCAGTTCGCAAAGGTGATGAATCCAGACCTGAACTAAAAGAGTTGGCTAAGGCATTGAACTCTCC
AGAAGTGAAAAAATTTATTAATAAGAAATATCAGGGTGCAGTTGTACCTGCTTTTTAG

Protein sequence :
MKKFVSIRKRILITFIIFGFLMTSLIGYGAKQVNTSNKQTQNNVKKKITIKVGATPVPHAEILNVVKPILEKKGIILNIV
EFTDYVQPNLKLAEKELDANFFQHIPYLEDFSKEHRLNLTYIAKVHIEPMGIYSQKVKKLNQLKQGATIAIPNDATNGGR
ALLLLQSAGLIKLKPNVGIKAKVSDIIKNPKKIKIIELEAATLPRVLPDVDAAVINTNYALEAKLVPTKDALFIETANSP
YVNVLAVRKGDESRPELKELAKALNSPEVKKFINKKYQGAVVPAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nlpA AAW51766.1 NlpA Not tested AGI-3 Protein 1e-35 43
SAAV_0786 YP_003281709.1 ABC transporter substrate-binding protein Not tested SaPIAv Protein 6e-39 42