Gene Information

Name : Calkr_1139 (Calkr_1139)
Accession : YP_004026260.1
Strain : Caldicellulosiruptor kristjanssonii 177R1B
Genome accession: NC_014721
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-(acyl-carrier-protein) reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1195396 - 1196142 bp
Length : 747 bp
Strand : +
Note : KEGG: ate:Athe_1156 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGGAACTTTTGAAAGATAAAGTGGTGCTCATCACGGGTGCATCACGTGGAATTGGAAGAGCAATTGCTTTAAAGTTTGC
TCAAAACGGAGCGAATGTAATTATTAACTATTCGTCGAGTCAGTCCCAAGCAGAAGAATTAAAAGAAGAGATAGAGAAAA
TAGGAACAAAAGCAATGATAATAAAATGTGATGTTTCAAATGCAGATGAGGTAAGTCAGATGTTCTCACAGGTGGAAAAG
GAGTTTGGAAGGCTTGATATACTTGTTAACAATGCCGGAATTACAAAAGATGGACTAATTCTTAGAATGAATGAGGAAGA
CTTTGATAAGGTTATTGCAATAAACCTAAAAGGAGCGTTTTTGTGTGCAAGAGCAGCTGCCAAAATGATGGTAAAACAGC
GGTCTGGCAATATAATTAATATATCCTCTGTTGTAGGAATTGCGGGCAATATTGGTCAGGCAAATTATGCAGCGTCCAAA
GCAGGAATAATAGGTCTTACAAAATCTCTTGCAAAAGAACTTGCGTCCCGAAATATCAGGGTAAATGCAATAGCACCAGG
CTTTATTAAAACTGACATGACAGAGGTTTTAAGTGACAAGGTAAAAGAGGCCATGCTTTCTTCCATCCCACTTGGTCGGT
TTGGCGAGGCTGATGAGGTAGCAAATGTAGCACTTTTCCTTGCATCTAATCTTTCGTCCTATATTACAGGGCAAGTTATT
GTTGTTGACGGTGGGATGATTATGTAA

Protein sequence :
MELLKDKVVLITGASRGIGRAIALKFAQNGANVIINYSSSQSQAEELKEEIEKIGTKAMIIKCDVSNADEVSQMFSQVEK
EFGRLDILVNNAGITKDGLILRMNEEDFDKVIAINLKGAFLCARAAAKMMVKQRSGNIINISSVVGIAGNIGQANYAASK
AGIIGLTKSLAKELASRNIRVNAIAPGFIKTDMTEVLSDKVKEAMLSSIPLGRFGEADEVANVALFLASNLSSYITGQVI
VVDGGMIM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 8e-41 43
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-40 43
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-40 43
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 9e-41 43
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 4e-33 42
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 8e-42 42
ORF SG27 AAN62249.1 putative short-chain type dehydrogenase / reductase Not tested PAGI-3(SG) Protein 2e-18 41