Gene Information

Name : Calkr_1066 (Calkr_1066)
Accession : YP_004026187.1
Strain : Caldicellulosiruptor kristjanssonii 177R1B
Genome accession: NC_014721
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 1128452 - 1128916 bp
Length : 465 bp
Strand : +
Note : PFAM: protein of unknown function DUF163; KEGG: ate:Athe_1077 protein of unknown function DUF163

DNA sequence :
ATGATAAGAATAATCAGTGTTGGAACAATAAAAGAGAAGTATTTTCTACAGGCATGTGAAGAGTACAAAAAAAGACTTTC
GCGGTGGGTAAAAGTCGAAGAAATAGAGATAAAAGAAGAAGATGAAAATAAATATTCCAATATAGAAACGCTTTTAGAAA
AAGAAGCTGATAAGATTTTAAAGCATATAAAGAAAGACCAATTTATAATTGCGTGTGATGTTAATGGAATTGAGTTTTCA
TCAGAAGAATTTTCTGAGATTCTAAGGAAAAACATGAATAGAAGTAAGGATATTACTTTTATCATTGGCAGTTCCAACGG
TCTTTCAAATGAAGTGAAAAGAAGAGCTGATTTGCTTCTCTCATTTTCAAAACTCACTTTTCCTCATCAGCTTTTTAGAG
TCTTACTTTATGAACAGATTTACAGAGGATTGTCAATTATTTATGGGACAAAGTACCATAAATAA

Protein sequence :
MIRIISVGTIKEKYFLQACEEYKKRLSRWVKVEEIEIKEEDENKYSNIETLLEKEADKILKHIKKDQFIIACDVNGIEFS
SEEFSEILRKNMNRSKDITFIIGSSNGLSNEVKRRADLLLSFSKLTFPHQLFRVLLYEQIYRGLSIIYGTKYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 1e-17 46
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 4e-20 43
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-20 43
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 1e-20 42
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 3e-20 42
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-20 42
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 3e-20 42
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-20 42
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 3e-20 42
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 3e-20 42
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 3e-20 42
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 5e-17 42
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 3e-20 42
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 3e-20 42
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 3e-20 42
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 1e-19 42
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 3e-20 42
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 3e-20 42
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 7e-20 42