Gene Information

Name : Calkro_0806 (Calkro_0806)
Accession : YP_004023507.1
Strain : Caldicellulosiruptor kronotskyensis 2002
Genome accession: NC_014720
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 955975 - 956865 bp
Length : 891 bp
Strand : +
Note : KEGG: ate:Athe_1909 pyridoxal biosynthesis lyase PdxS; TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein

DNA sequence :
ATGAGCGAGGTTGTAAATGAGAGATATGAGCTCAACAAAAACCTTGCGCAGATGCTAAAAGGCGGTGTCATCATGGATGT
GACATCTCCAAAAGAGGCTGAGATTGCTGAAAAAGCAGGTGCTGTTGCTGTTATGGCTCTTCAAAAAGTTCCGGCAGATC
TGCGCAAAGAAGGCAAAGTAGCAAGAATGGCTGACCCGAAAATAATATTGGAAATTAAAAGTGCTGTTTCAATACCTGTT
ATGGCAAAGGTAAGAATTGGACACTTTGTTGAGGCACAGATTTTAGAAGCACTTGGTATAGATTATATTGACGAAAGTGA
AGTTTTAACTCCTGCTGATGAGGAGCATCACATTGACAAGTGGAAGTTCAAAGCTGCGTTCGTGTGCGGTGCAAGGGATT
TAGGCGAAGCTCTGAGGAGAATTCAAGAGGGAGCTTCTATGATAAGAACAAAAGGTGAGGCTGGGACAGGAAATGTAGTT
GAGGCGGTAAGACACCTTCGCAGAATAAATAAACAAATTAGCTATGCTGCATCGCTAAATAGAGATGAGCTTTATGCATA
TGCAAAGGAACTTGGAGTGTCCTATGAACTTTTGAAAAAAACAGCCGAGCTCAAACGTCTTCCTGTTGTCAACTTTGCAG
CAGGAGGAATTGCAACACCAGCCGATGCAGCTTTGATGATGCAGCTTGGTGCAGATGGCGTATTTGTCGGCTCTGGTATT
TTCAAGTCCAAAAATCCAGAGAAAAGAGCAAGGGCAATTGTGATGGCAACAACATATTACAATGACCCAAAAATCTTGGC
AGAAATATCATACGACCTTGGCGAAGAGATGGAAGGTATAGATTTGAGAAGTCTTTCTGAGCATGAACTTTTGAGTCTCA
GGGGGAATTAA

Protein sequence :
MSEVVNERYELNKNLAQMLKGGVIMDVTSPKEAEIAEKAGAVAVMALQKVPADLRKEGKVARMADPKIILEIKSAVSIPV
MAKVRIGHFVEAQILEALGIDYIDESEVLTPADEEHHIDKWKFKAAFVCGARDLGEALRRIQEGASMIRTKGEAGTGNVV
EAVRHLRRINKQISYAASLNRDELYAYAKELGVSYELLKKTAELKRLPVVNFAAGGIATPADAALMMQLGADGVFVGSGI
FKSKNPEKRARAIVMATTYYNDPKILAEISYDLGEEMEGIDLRSLSEHELLSLRGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-76 65
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 9e-77 65
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-76 65