Gene Information

Name : Calkro_0761 (Calkro_0761)
Accession : YP_004023470.1
Strain : Caldicellulosiruptor kronotskyensis 2002
Genome accession: NC_014720
Putative virulence/resistance : Resistance
Product : protein-tyrosine phosphatase, low molecular weight
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 909383 - 909796 bp
Length : 414 bp
Strand : -
Note : KEGG: ate:Athe_1932 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight

DNA sequence :
ATGAAACCAAGAGTTGCTTTTGTATGTGTTGGCAATTCATGCCGAAGCCAGATGGCAGAAGGTTTTGCCAAACACTATGG
AAAAGATTTGATTGAAGTATACAGTGCAGGAACAGATATCGCAAAAGAGGTAAACCCGCTTGCCATTGAGGTCATGAAAG
AGGTTGGAATTGATATCTCTTCACATTTCCCAAAGACAATATTCGATATCCCCAAAGAGGTAGACTTTTTAATCACAATG
GGCTGTGGTGTTGAGTGTCCGTTTATCCCATGCAAGGTCAAAGAAGATTGGGGACTACCTGACCCAGCAGGAAAGCCTAT
TGAAGAATTTAGAAGAGTAAGAGATGAAATAGAAAAAAAGGTATTGGAGCTGCTTGAACGAATTAAAAAAGAATATCATG
GGGAGGGAAAATAA

Protein sequence :
MKPRVAFVCVGNSCRSQMAEGFAKHYGKDLIEVYSAGTDIAKEVNPLAIEVMKEVGIDISSHFPKTIFDIPKEVDFLITM
GCGVECPFIPCKVKEDWGLPDPAGKPIEEFRRVRDEIEKKVLELLERIKKEYHGEGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 1e-20 54
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 3e-19 53
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 5e-19 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calkro_0761 YP_004023470.1 protein-tyrosine phosphatase, low molecular weight BAC0032 Protein 6e-19 52
Calkro_0761 YP_004023470.1 protein-tyrosine phosphatase, low molecular weight BAC0580 Protein 3e-19 51
Calkro_0761 YP_004023470.1 protein-tyrosine phosphatase, low molecular weight BAC0581 Protein 6e-17 49
Calkro_0761 YP_004023470.1 protein-tyrosine phosphatase, low molecular weight BAC0586 Protein 5e-17 45