|
Name : Calkro_0565 (Calkro_0565) Accession : YP_004023280.1 Strain : Caldicellulosiruptor kronotskyensis 2002 Genome accession: NC_014720 Putative virulence/resistance : Unknown Product : ntegrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 698016 - 699068 bp Length : 1053 bp Strand : + Note : PFAM: Integrase catalytic region; KEGG: cth:Cthe_3208 integrase catalytic subunit DNA sequence : ATGGTTCTTACTCAAGAGTATACCACATTACCTCGTACTTTTAAACACCTTACACCTTATGAAAGAGGTAAAATTTGCGC TCTTTTAAAAGAAGGGTTCTCACCAACTCAAATCGCTAAAAAACTTGGCCGTCATCGCAGCACCATTTACCGCGAAATAA AACGTGGCACCACAACTCAACGCCGTACAGATCTAACTACGTATGAAGCATACTTCCCAGAAACTGGCCAGGCGATATAT GAGAAGAACCGCTCTTTCTGTGGCCGAAAAAGTAAGATCCTCCAAGTTGAATCCTTCCTCCAATATGCTGAGCAAAAGAT ACTTCAAGACAAATGGTCCCCTGATGCTGTTGTAGGAGCTGCTCGGCGAGAAAAACTCTTTGACCCTTCGTCCATGGTTT GCACCAAAACCCTATACAACTATATCGACCGCTGCTTGCTTAAAGTCCGCAATATAGACCTTTTCATAAAAACCAGACGT AAACCCAAGAAGAATTCTTTGAGAAAACACAAGCGCCTTTTCGGCAAGAGTATTAGCGAGCGGCCTGATAGCATTGAAAA GCGTGAGGAGTTCGGCCATTGGGAAATCGACACTGTTCTGGGAAGACGCTCTAATGATCATGTTCTGCTGACCCTAACGG AAAGAAAAACTCGCTATCACCTGCTCCTCCCATTGGCAAGCAAAACTGCTGAGGCAGTGGATGAAGCGTTAAAGCAGCTA AAAAGCCAGTATGGTCTTATGTTTTCTCGGGTGTTTAAGAGCATCACTGCGGATAACGGTAGTGAGTTTGCCAATTTAAA TGTCCATGGGATTGATATTTACTATGCTCACCCTTACTCTGCCTGGGAACGAGCCACTAATGAGCGGCACAATGGTCTAG TCAGGCGGTTGATTCCTAAGGGAACAGCTATCAGTGAATTGTCACTTTCACAAATTGAGCGGGCGCAGAATTGGTGTAAT ACCTTGCCAAGAAAAATCCTTGGTTACCGCCAGCCAGCAGAGCTCTTTTTCAGGGAAATAGAACGGCTAACTTCTGAGTT TCAAAATTCATGA Protein sequence : MVLTQEYTTLPRTFKHLTPYERGKICALLKEGFSPTQIAKKLGRHRSTIYREIKRGTTTQRRTDLTTYEAYFPETGQAIY EKNRSFCGRKSKILQVESFLQYAEQKILQDKWSPDAVVGAARREKLFDPSSMVCTKTLYNYIDRCLLKVRNIDLFIKTRR KPKKNSLRKHKRLFGKSISERPDSIEKREEFGHWEIDTVLGRRSNDHVLLTLTERKTRYHLLLPLASKTAEAVDEALKQL KSQYGLMFSRVFKSITADNGSEFANLNVHGIDIYYAHPYSAWERATNERHNGLVRRLIPKGTAISELSLSQIERAQNWCN TLPRKILGYRQPAELFFREIERLTSEFQNS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0321 | YP_697650.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-68 | 51 |
| CPR_0628 | YP_697955.1 | IS1470, transposase | Not tested | Not named | Protein | 8e-69 | 51 |
| CPR_1078 | YP_698400.1 | IS1470, transposase | Not tested | Not named | Protein | 5e-69 | 51 |
| CPR_0379 | YP_697708.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-69 | 51 |
| CPR_0314 | YP_697643.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-69 | 51 |
| CPR_0967 | YP_698290.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-69 | 51 |
| CPR_0648 | YP_697974.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-68 | 51 |
| CPR_0659 | YP_697986.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-49 | 50 |
| CPR_0383 | YP_697712.1 | IS1470, transposase | Not tested | Not named | Protein | 8e-69 | 50 |
| CPR_1088 | YP_698410.1 | IS1470, transposase | Not tested | Not named | Protein | 7e-68 | 50 |
