Gene Information

Name : Calkro_0544 (Calkro_0544)
Accession : YP_004023261.1
Strain : Caldicellulosiruptor kronotskyensis 2002
Genome accession: NC_014720
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 665084 - 665848 bp
Length : 765 bp
Strand : -
Note : manually curated; PFAM: IstB domain protein ATP-binding protein; KEGG: ate:Athe_2292 IstB domain protein ATP-binding protein; SMART: AAA ATPase

DNA sequence :
ATGAGCAACTATGTGAAACTACTTAACAACTTAGAAGAGTTAGGTCTTCACAACATAAAGAATAACCTTGACAAATACTT
AGATTTAGTGGCAAGCGGAGAAAAAAGTATGACAGATGCATTATATGAACTTAGTAATTTAGAGATAAAAGCCAAAGAAG
AAAGGGCGATATTAGGATGTGTGAGGGTGGCAAATTTCCCATTTATAAAAGGTATAGAAGATTTTGATTTTTCATTTCAG
CCAAGTATAAACAAGCAACAGATAATGGACTTAATGAGTTTGAGATTTTTAGAAGGTAATGAAAATATACTATTTGTCGG
AACACCAGGGGTAGGGAAAACGCATCTAGCCACAGCAATAGGTATAGAGTGTGCAAAACGAAGGTATTCAACGTATTTTA
TACATTTTCAAGAGTTAATAGCTCAGCTAAAAAAAGCACTGATAGAGAACAGATTAGAATACAGGCTTAAACATTTTTCA
AAATATAAAGTTTTAATAATAGATGAGATAGGTTATTTGCCAATAGACAATGATGGAGCAAATTTATTTTTCCAGCTGAT
ATCGAGCAGATATGAGAAGAGCAGTACAATAATAACAACTAATGTTGTATTCTCAGAATGGGGAGAGATATTTGGTGGAG
CGACAATAGCAAATGCAATTTTAGATAGGCTACTGCATCATTCTTACGTGATTTTTATAAAAGGTCCTTCATACAGGTTA
CAGTCAAAAACAGCATATTTTAGCAATACAAACCAGCAAAGTTAA

Protein sequence :
MSNYVKLLNNLEELGLHNIKNNLDKYLDLVASGEKSMTDALYELSNLEIKAKEERAILGCVRVANFPFIKGIEDFDFSFQ
PSINKQQIMDLMSLRFLEGNENILFVGTPGVGKTHLATAIGIECAKRRYSTYFIHFQELIAQLKKALIENRLEYRLKHFS
KYKVLIIDEIGYLPIDNDGANLFFQLISSRYEKSSTIITTNVVFSEWGEIFGGATIANAILDRLLHHSYVIFIKGPSYRL
QSKTAYFSNTNQQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 9e-38 46
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-34 45
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 5e-37 45
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 5e-37 45
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 7e-37 45
api84 CAF28558.1 putative transposase Not tested YAPI Protein 5e-37 45
unnamed CAA21402.1 - Not tested HPI Protein 7e-37 45
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 5e-37 45
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 5e-37 45
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 5e-37 45
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 5e-37 45
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 6e-37 45
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 6e-37 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calkro_0544 YP_004023261.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 5e-38 46
Calkro_0544 YP_004023261.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 1e-34 45
Calkro_0544 YP_004023261.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 3e-37 45
Calkro_0544 YP_004023261.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 3e-37 45
Calkro_0544 YP_004023261.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 3e-37 45