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Name : Calkro_0528 (Calkro_0528) Accession : YP_004023246.1 Strain : Caldicellulosiruptor kronotskyensis 2002 Genome accession: NC_014720 Putative virulence/resistance : Unknown Product : preprotein translocase, seca subunit Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 645181 - 647727 bp Length : 2547 bp Strand : + Note : KEGG: ate:Athe_2104 preprotein translocase, SecA subunit; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; helicase domain protein; SecA Wing and Scaffold; SEC-C motif domain protein DNA sequence : ATGTTAAAGATAATTGAAAAGCTTATAGGTAGCTACAGTGAAAGAGAGATAAAAAAAATCTTGCCAATAGTTGACAAAAT AGAGTCGCTTGCACCAGAGTATGAAAGATTAACAGATGCAGAGCTGAGGCAAAAGACAGATATATTCAAACAGAGGCTAA AAAACGGCGAAACTTTGGACGATATCCTGCCAGAAGCATTTGCAGCTGTGCGAGAGGCTGCTTGGCGAACGCTCAGGATG CGCCATTTTAGAGTGCAGCTTATAGGTGGAATAGTTTTGCACCAGGGCAGGATTGCAGAGATGAAAACTGGTGAAGGTAA AACCCTTGTGGCAACTCTACCTGCGTACTTGAACGCTTTGGAGGGCAAGGGTGTTCATATAGTAACTGTCAATGACTACT TGGCAAAAAGAGACGCTGAGTGGATGGGACCTATTTACAATTTCTTGGGGCTTTCTGTTGGTGTTATAGTCCATGGACTT AGTCATGAAGAGAGGAAAAAAGCATACAACTGTGATATTACCTATGGTACAAATAACGAGTTTGGGTTTGATTACTTGCG AGACAACATGGCAATTTACAAAGAAGAACTTGTGCAAAGAGAGTTAAACTATGCAATAATCGATGAGGTTGACTCAATCT TGATTGATGAGGCAAGAACGCCTCTTATCATCTCAGGTCCTGCTGAGAAATCAACAGACCTTTACAAAAGAGCTGACAAT TTTGTAAGAAGACTAAAACCTCTTTATTATAACAGTGATGATGACAAACAAATGCCTGATACAAACGGCTATGACTATAT AGTAAACGAGAAAAGACACACAGTTTCGCTCACAGAAGAGGGTATCAAGAAGGCCGAGAAATATTTTGGTGTTACAAACT TAGCTGACCCAGAAAATGCAACGCTTCATCATCACATTATCCAGGCATTGAAAGCCCATGCTCTTATGAAAAGAGATAGG GACTATGTTGTAAAAGATGGGCAGGTAATAATTGTTGATGAGTTCACAGGAAGATTGATGTACGGACGAAGGTTTTCGGA GGGGCTTCACCAAGCAATAGAGGCAAAAGAAGGTGTGAGGATAGAAAGAGAGAGCAAAACTTTAGCAACAATAACTTTTC AGAACTATTTCAGGCTTTACAAAAAACTTGCTGGTATGACAGGTACTGCAAAAACTGAAGAGCAGGAGTTCAGAGAGATT TACAAGCTTGATGTTATAGAAATTCCAACTCATAAACCAATGATAAGAATTGACCATCCAGACAAGGTTTACAAGACAGA AAAGGCAAAGTTTGAAGCAATTGTTCAGGAGATTGTTGAGACTCATAAGAAAGGCCAGCCTGTTTTGGTTGGTACAGTGT CAATTGAGAAGTCTGAGATGCTGAGCGAGATGCTCAAAAAACATGGTATAAAACATGAAGTTTTAAATGCGAAACATCAT GAAAAAGAGGCAATGATAATTGCAAAGGCTGGTCAAAGAGGTGCTGTAACAATTGCAACCAACATGGCAGGCCGTGGAAC AGACATTGTTTTGGGCGAGGGTGTTGCTGAGCTTGGTGGACTCAAAGTAATCGGCACAGAAAGACATGAGAGCAGGCGAA TAGACAACCAGCTTCGTGGAAGAGCCGGCCGTCAGGGTGACCCTGGTGAATCAAGGTTCTATGTATCATTGGAAGACGAT TTAATGAGACTTTTTGGTTCAGAGAGGATTAAAAATCTTGTTGAATCGCTGGGCTTGCCTGATGACCAGCCAATTGAACA TAAGATCTTGTCTGATGCAATTGAAAAGGCACAAAAGAGGGTTGAGGCACGAAACTTCGAGATACGAAAACATCTTTTGC AGTTTGACGATGTTTTGAACAAGCAAAGAGAGATAATATACTCACAAAGGCGCAAGGTTTTAGAAGGCGAGAACTTAAGG GATTCTATCCTTGGCATGATAGATGAGCTTGTGGACTACAAGATAAAAATTTACACAGGCGAAAGTCCTCACCCTGAAGA CTGGGATATAAAAGGTCTTTTGCAGGATTTGAAGTTTATATTCTTGGATAGTGAGCTTTCTGAGCAGGATGCAAAAAATA TGACAAAACAGGAGCTGAAAGAAAAGCTCATCTCAATTGCAAAAGAAAAATATGAGAAGAAAGAACAAGAAATTGGCGAG CTTATGCGTGAGCTTGAAAGGGTTGTGCTTTTGCGAGTTGTTGACATGCACTGGATGGAGCATATAGATGCTGTTGAGCA GCTGAGAGAAGGTATATCGCTTCGTGCGATTGGTCAAAAAGACCCAATAGTTGAGTTCAGGTTCGAAGCGTTTGAGATGT TTGATGAGATGATAAAGAGAATTCAGGAGGACACAATAAAGATTATACTTCATGCAAATGTTGAAAATATGCCTCAGAGA GAAAGAGTTGCAAAAGAAATGTATGAAAATGCGCCATCAGACACGCCTGTAAGAAAACCTGTTGTAAAAACACAGAAGGT TGGGAGAAACGATCCATGTCCTTGCGGTAGCGGCAAAAAATACAAAAAATGCTGTGGCGCAGTTTAA Protein sequence : MLKIIEKLIGSYSEREIKKILPIVDKIESLAPEYERLTDAELRQKTDIFKQRLKNGETLDDILPEAFAAVREAAWRTLRM RHFRVQLIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDAEWMGPIYNFLGLSVGVIVHGL SHEERKKAYNCDITYGTNNEFGFDYLRDNMAIYKEELVQRELNYAIIDEVDSILIDEARTPLIISGPAEKSTDLYKRADN FVRRLKPLYYNSDDDKQMPDTNGYDYIVNEKRHTVSLTEEGIKKAEKYFGVTNLADPENATLHHHIIQALKAHALMKRDR DYVVKDGQVIIVDEFTGRLMYGRRFSEGLHQAIEAKEGVRIERESKTLATITFQNYFRLYKKLAGMTGTAKTEEQEFREI YKLDVIEIPTHKPMIRIDHPDKVYKTEKAKFEAIVQEIVETHKKGQPVLVGTVSIEKSEMLSEMLKKHGIKHEVLNAKHH EKEAMIIAKAGQRGAVTIATNMAGRGTDIVLGEGVAELGGLKVIGTERHESRRIDNQLRGRAGRQGDPGESRFYVSLEDD LMRLFGSERIKNLVESLGLPDDQPIEHKILSDAIEKAQKRVEARNFEIRKHLLQFDDVLNKQREIIYSQRRKVLEGENLR DSILGMIDELVDYKIKIYTGESPHPEDWDIKGLLQDLKFIFLDSELSEQDAKNMTKQELKEKLISIAKEKYEKKEQEIGE LMRELERVVLLRVVDMHWMEHIDAVEQLREGISLRAIGQKDPIVEFRFEAFEMFDEMIKRIQEDTIKIILHANVENMPQR ERVAKEMYENAPSDTPVRKPVVKTQKVGRNDPCPCGSGKKYKKCCGAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 7e-127 | 43 |
