Gene Information

Name : Calkro_0358 (Calkro_0358)
Accession : YP_004023080.1
Strain : Caldicellulosiruptor kronotskyensis 2002
Genome accession: NC_014720
Putative virulence/resistance : Virulence
Product : capsular exopolysaccharide family
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : 2.7.10.2
Position : 476801 - 477574 bp
Length : 774 bp
Strand : +
Note : KEGG: clj:CLJU_c05160 exopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family

DNA sequence :
ATGAATGCCGTCAAAGAAGTCATAGCACTATATAATCCTCGCTCGCCCATCACAGAAAGCTACAGAATGCTTCGAACCAA
CATTCAATATTCAAGTTTGGACAAGCCCATAAAAACCATAGTTGTCACAAGCACTGGACCATCAGAAGGAAAAACAGTTA
CATGCGCAAATTTGGCAGTTGTAATGGCCCAAGCGGGGAGTAAAGTATTGGTCATAGATGCAGACTTAAGGCGCCCTGCT
ATACATAAAGTATTTGGTGTTAGTAATAAAGTGGGACTTACAAATCTTCTTGTTGAAAATAAAAATTTTGAAGAGATAGT
TCAAAAAGATGGTGTTGAGGGGCTGGATTTGATAACATCTGGACCTATTCCACCAAACCCAGCTGAACTTCTGGGTTCCA
AGAAATTTGAAAATTTCTTAAATACAATTAGCCAAAGTTACGATTACATAATCATAGATACGCCACCCTGTGGAAGCTTA
ACAGATGCAGCTATTATTGGTAGAATTGTAGATGGTGTAATTTTGGTAGCAGCTGCAGGTGAAGTACAGATTGAAGCAAT
CCAGCAGGCAAAGGAGAACTTGCAAAAGGTCAATGCCAACATAATAGGTGTTGTTTTAAATAAAGTAAAACGACAAACGT
CAAGCTACTATTATTACTATTACTACTACTATTATTACCAAGATGAAAACGGAGAGGTTGTCAAGAAAAAGAAGACAGGC
AGGAGAAGAAAGAAAGATGATAGATATACACTGCCATCTGATGGTGGGCGTTGA

Protein sequence :
MNAVKEVIALYNPRSPITESYRMLRTNIQYSSLDKPIKTIVVTSTGPSEGKTVTCANLAVVMAQAGSKVLVIDADLRRPA
IHKVFGVSNKVGLTNLLVENKNFEEIVQKDGVEGLDLITSGPIPPNPAELLGSKKFENFLNTISQSYDYIIIDTPPCGSL
TDAAIIGRIVDGVILVAAAGEVQIEAIQQAKENLQKVNANIIGVVLNKVKRQTSSYYYYYYYYYYYQDENGEVVKKKKTG
RRRKKDDRYTLPSDGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpsFD YP_006310771.1 putative autophosphorylating protein tyrosine kinase Not tested FWisland_4 Protein 4e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calkro_0358 YP_004023080.1 capsular exopolysaccharide family VFG1368 Protein 2e-27 45