Gene Information

Name : Calkro_0337 (Calkro_0337)
Accession : YP_004023060.1
Strain : Caldicellulosiruptor kronotskyensis 2002
Genome accession: NC_014720
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 456196 - 456873 bp
Length : 678 bp
Strand : +
Note : KEGG: csc:Csac_2447 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATCGAACTTTATGATATCTACAAAATCTACAAAATGGGCGAAAATGAGGTGTATGCTTTAAACGGTATTAACCTAAA
AATCAATGCTCACGAGTTTGTTGCAATAGTTGGACCATCCGGCTCAGGAAAATCAACTCTTATGAACATCATAGGCTGTC
TTGACACACCAACATCTGGCACATACATACTGGATGGTCATGAAGTCAGCAGGCTCAACGACAACCAGCTTGCAGAGATT
CGAAACAGCAAGATAGGCTTTGTGTTTCAAAACTTTAACTTAATACCCCAGCTCACAGCTCTTGAAAATGTTGAGCTTCC
TTTAATCTACAAAGGTGTTCCGGCCTCTATGCGTCACAAGCTTGCAAAAGAAGCTCTTGCAAGGGTTAGCTTGGAACATA
GAATGCACCACAGACCAAGAGAGCTATCTGGCGGTCAGCAGCAGAGAGTTGCAATTGCAAGGGCGCTTGTCACAAACCCA
GCAATAATTCTTGCTGATGAGCCAACAGGAAACTTGGACTCAAAGTCAGGTGCTGAGATAATTCAAATATTTAAGGAACT
TCATGCACAGGGTAGCACAATTGTTTTAATCACACACGACAACAACATAGCAGCTCAGGCAAGAAGAATTGTGCGGATTC
AGGATGGTCAAATAATAGAAGACAAGGAGGTGAGCTGA

Protein sequence : 
MIELYDIYKIYKMGENEVYALNGINLKINAHEFVAIVGPSGSGKSTLMNIIGCLDTPTSGTYILDGHEVSRLNDNQLAEI
RNSKIGFVFQNFNLIPQLTALENVELPLIYKGVPASMRHKLAKEALARVSLEHRMHHRPRELSGGQQQRVAIARALVTNP
AIILADEPTGNLDSKSGAEIIQIFKELHAQGSTIVLITHDNNIAAQARRIVRIQDGQIIEDKEVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-37 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calkro_0337 YP_004023060.1 ABC transporter-like protein NC_012469.1.7686878. Protein 5e-62 60
Calkro_0337 YP_004023060.1 ABC transporter-like protein CP001581.1.gene598.p Protein 5e-42 49
Calkro_0337 YP_004023060.1 ABC transporter-like protein CP001581.1.gene798.p Protein 3e-41 48
Calkro_0337 YP_004023060.1 ABC transporter-like protein NC_008702.1.4606598. Protein 9e-50 48