Gene Information

Name : Calkro_0274 (Calkro_0274)
Accession : YP_004023004.1
Strain : Caldicellulosiruptor kronotskyensis 2002
Genome accession: NC_014720
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 372719 - 373411 bp
Length : 693 bp
Strand : -
Note : KEGG: ate:Athe_2587 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATTGAATTAAAGGATATAAAAAAGGTGTACAGTCTTGGGAAGGTGGAACTTGAAGTACTCAAAGGAATTTCTCTTAA
AGTAGAAAAAGGAGAATATGTTGCAATTGTAGGTCCTTCAGGGTCTGGCAAATCAACGCTAATGAACATCATCGGACTTC
TTGACAAGCCCACTTCAGGAAGTTATCTTTTGGATGGTCTTGAGGTGTCAACATTGAACGACATGCAGCTTGCATCGCTT
AGAAACAAAAATATAGGTTTTGTTTTTCAATCATTCAACCTGCTTAGTAAACTCAATGCCCTTGAAAACGTTGAACTTCC
AATGATATACGCAAAAATTCCTCCCAAGGAAAGAAGACAAAGGGCACTTTCTGCTTTAGAGCGTGTTGGTCTTTCAGACA
GAATTTATCACAGACCAAATGAGCTCTCAGGTGGTCAGCAGCAAAGAGTTGCCATTGCCCGTGCAATTGTTATGAATCCT
TCTTTCTTGCTTGCCGATGAGCCAACTGGAAACTTAGATACTGCATCCAGTATTGAAATAATGAAGATATTCCATGAACT
GAACAAAGCCGGTACAACCATCATAATGGTAACCCATGAACAGGACATTGCAAACCATGCAAAGAGAATCATCAGAATCA
GAGATGGTATGATAATTGATGATGCCCCGGTAAAAAACAGGATAACATACTAA

Protein sequence : 
MIELKDIKKVYSLGKVELEVLKGISLKVEKGEYVAIVGPSGSGKSTLMNIIGLLDKPTSGSYLLDGLEVSTLNDMQLASL
RNKNIGFVFQSFNLLSKLNALENVELPMIYAKIPPKERRQRALSALERVGLSDRIYHRPNELSGGQQQRVAIARAIVMNP
SFLLADEPTGNLDTASSIEIMKIFHELNKAGTTIIMVTHEQDIANHAKRIIRIRDGMIIDDAPVKNRITY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-34 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-31 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calkro_0274 YP_004023004.1 ABC transporter-like protein NC_012469.1.7686878. Protein 5e-58 62
Calkro_0274 YP_004023004.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-49 53
Calkro_0274 YP_004023004.1 ABC transporter-like protein CP001581.1.gene798.p Protein 4e-38 48
Calkro_0274 YP_004023004.1 ABC transporter-like protein NC_012469.1.7686946. Protein 9e-30 43
Calkro_0274 YP_004023004.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-33 43