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Name : Calkro_2408 (Calkro_2408) Accession : YP_004025046.1 Strain : Caldicellulosiruptor kronotskyensis 2002 Genome accession: NC_014720 Putative virulence/resistance : Unknown Product : alpha amylase catalytic subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 2630212 - 2631885 bp Length : 1674 bp Strand : + Note : KEGG: ate:Athe_0165 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain DNA sequence : ATGGACTTGCACAAAAAGTGGTGGAAGGAAGCTGTTGTATATCAAATCTATCCTCGAAGTTTTTATGACTCAAACGGTGA TGGAATTGGAGATTTGCCAGGAATAATAGAAAAACTTGATTATCTACAAGAACTTGGAGTGGATGTTATTTGGCTAAATC CTATTTACAAATCTCCAAATGCAGACAACGGTTATGACATCAGCGATTACTATGATATCATGGACGAGTTTGGTACAATG GAAGACTTTGATAGGCTCTTGAATGAAGCTCACAAAAGAGGAATTAAAATTGTAATGGACCTTGTTGTGAACCACACATC TGATGAACACAAATGGTTTTTGGAGTCCAGAAAATCAAAAGACAATCCTTACAGAGATTTTTATTTTTGGCGCCCTGGTA AAAATGGAGGACCTCCTAATAACTGGACATCTTTTTTCAGCGGCCCTGCATGGAAATACGATGAGTTGACAGGAGAATAT TACCTTCACCTTTTTGCTGTAAAGCAACCAGACCTCAACTGGAACAATCCTCAGGTCCGTCAAGAAATTTACAAAATGAT GAAGTGGTGGCTTGACAAAGGCATAGATGGATTTAGAATGGATGTAATAAATCTCATTTCAAAAGTTGAGGGGCTACCAG ATGACCCAGATGAAAATCAAGGAGGCTTGATTGGTTTTAAATACTATGCCAACGGTCCAAGGGTGCATGAATATCTTCAG GAAATGAACAGAGAAGTGCTTTCAAAATACGACATCATGACAGTAGGTGAGACTCCATTTGTAACTCCTGAGATTGCAAA GCTATATGTAGAGTATGATAGAAATGAGCTTAATATGATATTTCATTTTGAGCACATGGATATGGACTGCAGCGGCAGCA AGTGGAATATAAAACCTTGGAAACTCACTGATTTGAAAAAGATAATGTTCAAGTGGTATTTGGCTTTAAAAGACAAGGGC TGGAATTCGCTTTATCTTAACAACCATGACCAGCCAAGGATGGTCTCACGCTTTGGAAACGACAAAGAGTACAGAGTTGA GTCTGCAAAGCTTTTAGCAACCCTGCTTCACACATGGCAGGGAACTCCTTATATCTACCAAGGTGAAGAGATTGGTATGA CAAACTGCAAGTTTGAAAGTTTTGATGAGTTCAGGGACATTGAAACACTCAACTGGTACAAAGAGATGAAAAAGCTTGGA AAATCAGATGAAGAGCTTTTAGAAATCTTAAACAAAAGAAGTAGAGACCATGCACGAACACCTATGCAGTGGGATGATTC TAAAAATGCAGGATTTACAAAAGGCACCCCATGGATAAAGGTAAATCCAAATTATAAGGAAATAAATGTTAAAAAAGCTT TAGAAGATAAAAATTCAGTGTTTTATTACTATAAGAAATTGATTGAACTTAGAAAAAAGCATCCTGTCATTGTATATGGG GATGTTCAAATGCTTTATGAGGACGATGAAAAGATCTTTGCATATACAAGAAGCTATGAAGATGAAAGGCTTCTTGTTGT AATGAACTTTTCTGAAGAAGAAAGCGAGTTTTTAGCACCAAATGAAATATTTACCCAAAAACCTGAACTTCTGATAAGTA ACTATGAAATTGACGACAATATCCAAGAAAAAATTGTTTTAAAACCTTATGAATCGAGGGTATATAAAATATAA Protein sequence : MDLHKKWWKEAVVYQIYPRSFYDSNGDGIGDLPGIIEKLDYLQELGVDVIWLNPIYKSPNADNGYDISDYYDIMDEFGTM EDFDRLLNEAHKRGIKIVMDLVVNHTSDEHKWFLESRKSKDNPYRDFYFWRPGKNGGPPNNWTSFFSGPAWKYDELTGEY YLHLFAVKQPDLNWNNPQVRQEIYKMMKWWLDKGIDGFRMDVINLISKVEGLPDDPDENQGGLIGFKYYANGPRVHEYLQ EMNREVLSKYDIMTVGETPFVTPEIAKLYVEYDRNELNMIFHFEHMDMDCSGSKWNIKPWKLTDLKKIMFKWYLALKDKG WNSLYLNNHDQPRMVSRFGNDKEYRVESAKLLATLLHTWQGTPYIYQGEEIGMTNCKFESFDEFRDIETLNWYKEMKKLG KSDEELLEILNKRSRDHARTPMQWDDSKNAGFTKGTPWIKVNPNYKEINVKKALEDKNSVFYYYKKLIELRKKHPVIVYG DVQMLYEDDEKIFAYTRSYEDERLLVVMNFSEEESEFLAPNEIFTQKPELLISNYEIDDNIQEKIVLKPYESRVYKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 4e-150 | 58 |
