Gene Information

Name : Calkro_2255 (Calkro_2255)
Accession : YP_004024907.1
Strain : Caldicellulosiruptor kronotskyensis 2002
Genome accession: NC_014720
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein thic
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 2464911 - 2466173 bp
Length : 1263 bp
Strand : -
Note : KEGG: ate:Athe_0373 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGACTCAAATGAGCTTAGCAAAACAGGGGATATTTACAAGAGAGATGGAGCTTGCCATAAAAAATGAGGAGATAGATAA
AGATGAGTTTTTGCAAAAGGTTGCAGAGGGCAAAATTGTAATTCCTGCAAATAAGAATAGAAAAAGAGACAAATATTTTG
CCATTGGCGATGGGACATATGTCAAGATAAATGTTAATCTTGGTGTGTCAGAGGCATGTCCAAACTTTGATATAGAGCGC
CAAAAGCTTGAACTTGCCAAAAAATTTGATGTTGAATCTGTAATGGATTTATCGAGCGGGCTTGATGCTTCAAACTTCAG
AAAATACATTCTTCAAAACTATGACTTTATAGTAGGAACAGTTCCAGTTTACCAGGTTGCATCAAGGTATGATGACATCA
CAAAGGTTGACAGCAAAGAGTTTATAGAAGAAATTGAAAGGCAGGCAGAAGAAGGAGTTGACTTTTTCACAATCCATGCA
GGGATTACAAGAAGGACTTTAGAGAGGTTTGAAAAAAATGATCGTTTGCTCAAGATTGTCTCAAGAGGCGGAGCACTTCT
TTATAAATGGATGATGGCAAACCAAAAAGAAAATCCTTTGTATGAGCATTTTGATGAGATTTTGAAGATATGCAAAAAAC
ATGATGTTACAATCAGCCTTGGCGATAGCCTAAGACCAGGTGCGGTGGCTGATGCAACAGACGCGCTGCAGATAGAAGAA
CTTATAAACCTTGGCGAGCTTACAAAAATGGCCTGGAAAGAGGATGTGCAGGTGATGATAGAAGGGCCAGGGCACATGAG
AGCAAACGAGATTGCAGCAAACATGGTAATTCAAAAGAGGCTTTGCCACGGCGCACCGTTTTATGTCTTAGGTCCTCTTA
CAACAGACATTGCAGCAGGATACGACCATATATCAGGTGCGATGGGTGCGCTCATTGCAGCTTTAAATGGAGCAGATTTT
CTGTGCTATGTTACACCTGCTGAACATTTGAGACTTCCATCTTTAGAGGATGTCAAAGAAGGGATTGTTGCGTTCAAAAT
TGCAGCGCACAGTGCAAATATAGCAAAAGGCTTTAAAAAGCCACTTGAAAAGGATATTGAGATGTCAGTAGCAAGAAGAG
ACCTTGACTGGGAAAAGATGATAAGCCTTTCGGTTGACCCTGAGAAGGCAAGAGAGTACAGAAACAGTTTCTCTTCTGAT
ACATGTTCAATGTGTGGAAGACTCTGCGCTGTAAAAAATTCAAGGGATGAAGCTGTTTTATAA

Protein sequence :
MTQMSLAKQGIFTREMELAIKNEEIDKDEFLQKVAEGKIVIPANKNRKRDKYFAIGDGTYVKINVNLGVSEACPNFDIER
QKLELAKKFDVESVMDLSSGLDASNFRKYILQNYDFIVGTVPVYQVASRYDDITKVDSKEFIEEIERQAEEGVDFFTIHA
GITRRTLERFEKNDRLLKIVSRGGALLYKWMMANQKENPLYEHFDEILKICKKHDVTISLGDSLRPGAVADATDALQIEE
LINLGELTKMAWKEDVQVMIEGPGHMRANEIAANMVIQKRLCHGAPFYVLGPLTTDIAAGYDHISGAMGALIAALNGADF
LCYVTPAEHLRLPSLEDVKEGIVAFKIAAHSANIAKGFKKPLEKDIEMSVARRDLDWEKMISLSVDPEKAREYRNSFSSD
TCSMCGRLCAVKNSRDEAVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 2e-71 44
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 2e-71 44