Gene Information

Name : Calkro_1816 (Calkro_1816)
Accession : YP_004024481.1
Strain : Caldicellulosiruptor kronotskyensis 2002
Genome accession: NC_014720
Putative virulence/resistance : Unknown
Product : ribonuclease ph
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 1982268 - 1983044 bp
Length : 777 bp
Strand : -
Note : TIGRFAM: ribonuclease PH; KEGG: ate:Athe_0837 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2

DNA sequence :
ATGAGACAAGACCAGAGAGCTTACAATGAGATTCGACCAATAAAAATAACAAGAAACTTCATCAAATATGCAGAAGGTTC
ATGCCTTATCGAAATGGGCAACACAAAAGTAATTGTCACAGCAACCATTGACGACAAGGTACCACCGTTTAAAAAGGGAA
GTGGGGAAGGATGGATAACAGCTGAATACTCAATGTTACCCCGTGCAACCCAGCAGAGAAATGTAAGAGATATAAATAAA
CTGAGGCTCAGTGGAAGAAGTCATGAAATTCAAAGACTCATTGGAAGGGCACTCAGAGCAGGTATAAATTTTAAAGCGCT
TGGAGAAAGAGTAATAATCATAGACTGCGATGTAATCCAGGCAGACGGTGGAACACGCACAGCTTCCATAACTGGCGGGT
TTATTGCCATGTTTGATGCGTGCAAAAAACTTTACGATGAAAAGATAATTGAAAACTTTCCTGTAACAGACTTTGTTGCG
GCTGTATCTGTGGGAATTTGCGACGGCGTTGAAATGCTTGACCTTTGCTTTGAAGAGGATTCAAAAGCTGCAGTTGACAT
GAACCTTGTTATGAACGATAAAGGTGAGTTTATTGAGATACAGGGAACTGCTGAAGGAGCGCCTTTTTCGTGGGATCAAT
TTCAGAAACTATTAGAACTTGGAAAGCAAGGCATACAAAAGATAATAGAAATACAGAGGGAAGTTTTGGGTGAGGACTGC
AATCTTGTTGGGAGTGTGCCAAAAGATGAGAAAACTTTTCGTTGCGACCAAGAATGA

Protein sequence :
MRQDQRAYNEIRPIKITRNFIKYAEGSCLIEMGNTKVIVTATIDDKVPPFKKGSGEGWITAEYSMLPRATQQRNVRDINK
LRLSGRSHEIQRLIGRALRAGINFKALGERVIIIDCDVIQADGGTRTASITGGFIAMFDACKKLYDEKIIENFPVTDFVA
AVSVGICDGVEMLDLCFEEDSKAAVDMNLVMNDKGEFIEIQGTAEGAPFSWDQFQKLLELGKQGIQKIIEIQREVLGEDC
NLVGSVPKDEKTFRCDQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 3e-53 53