Gene Information

Name : Calkro_1540 (Calkro_1540)
Accession : YP_004024214.1
Strain : Caldicellulosiruptor kronotskyensis 2002
Genome accession: NC_014720
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-(acyl-carrier-protein) reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1710669 - 1711415 bp
Length : 747 bp
Strand : -
Note : KEGG: ate:Athe_1156 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGGAACTATTAAAAGATAAAGTGGCGCTCATTACAGGCGCATCACGTGGAATTGGAAGAGCTATTGCTTTAAAGTTTGC
TCAAAACGGAGCAAATGTAGTTATTAACTATTCGTCAAGTCAGTCCCAAGCAGAAAATTTGAAAGAAGAGATAGAGAAAA
TAGGAACAAAAACGATGATAATAAAATGTGATGTTTCAAATCCAGATGAGGTAAGTCATATGTTTTCACAAGTGGAAAAG
GAGTTTGGAAGGCTTGATATACTTGTTAATAATGCCGGAATTACAAAAGATGGACTAATTCTTAGAATGAATGAGGAGGA
TTTTGATAAGGTTATTGCGATAAACCTAAAAGGAGCGTTTTTGTGCGCAAGAGCAGCTGCCAAAATGATGGTAAAACAGC
GGTTTGGCAATATAATTAATATATCCTCTGTTGTAGGAATTGCAGGAAATGTTGGACAGGCAAATTATGCAGCGTCCAAA
GCAGGAATAATAGGTCTTACTAAGTCTCTTGCAAAAGAACTTGCGTCCCGCAATATCAGGGTAAATGCAATAGCACCAGG
ATTTATTAAAACTGACATGACAGAAGTTTTAAGTGACAAGGTAAAAGAGGCCATGCTTTCTTCCATCCCACTTGGTCGAT
TTGGCGAGGCTGATGAGATTGCAAACGTGGCACTTTTTCTTGCCTCAAGCCTTTCATCCTATATTACTGGGCAAGTTATT
GTTGTTGACGGTGGGATGATTATGTAA

Protein sequence :
MELLKDKVALITGASRGIGRAIALKFAQNGANVVINYSSSQSQAENLKEEIEKIGTKTMIIKCDVSNPDEVSHMFSQVEK
EFGRLDILVNNAGITKDGLILRMNEEDFDKVIAINLKGAFLCARAAAKMMVKQRFGNIINISSVVGIAGNVGQANYAASK
AGIIGLTKSLAKELASRNIRVNAIAPGFIKTDMTEVLSDKVKEAMLSSIPLGRFGEADEIANVALFLASSLSSYITGQVI
VVDGGMIM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 2e-32 42
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 7e-40 42
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 9e-41 42
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-39 42
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-39 42
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 9e-40 42