Gene Information

Name : Calkro_1172 (Calkro_1172)
Accession : YP_004023852.1
Strain : Caldicellulosiruptor kronotskyensis 2002
Genome accession: NC_014720
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 1339365 - 1340291 bp
Length : 927 bp
Strand : -
Note : PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; manually curated; KEGG: ate:Athe_1542 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase

DNA sequence :
ATGAGACATTTTCTTCATCTAAATGACCTTTCAAAAGAAGATATTCTGTATTTAGTTGAACTTGCAAGTAAGTTAAAAAA
AGAAGCTAAAAGAGGTTTTTATTTCCCTTACTTAAAGAACAAAGCGTTGGGACTTATATTTACAAAGGCTTCAACAAGGA
CACGTGTATCATTTGAAGTGGGAATCCATCAGCTTGGCGGATATTCACTCTATCTTGGGAAAAATGACCTTCAGCTTGGC
AGAGGTGAAACAATAGAGGATACAGCAAAGGTTCTGTCGCGATACCTTGACCTAATTGTTATAAGAACATATGAACAAAA
AGAGGTTGAAGAGTTTGCAAAATACTCTTCCATCCCAGTTATAAATGGGCTTACTGATGATTATCATCCAACCCAAATCA
TAGCTGATTTTCAGACAATTTTTGAGGAGAAAGGAAGGCTCAGTAATCTAAAAATTGCATATGTAGGAGACGGCAACAAC
GTAGCAGCCACACTTTTGGTAGGCGCAGCAAAACTTGGTCTCGACATTGCAGTTGCAACTCCACCCGGCTATGAAATAAA
GAAGGAAGTTGTAGACTTTGCACTTGATGAAGCAAAAAAGAGCAAAAGCAACATCATCTTTACTTATAGTCCAAAAGAGG
CTGTAAAAGATGCTGATGTTGTCTATACAGACACATGGGTTTCGATGGGACAGGAAGAAGAAAAGGAAAAAAGAATAAGG
GATTTTGAAGGATATCAGGTAGACAGCTCTCTTATGAAATTAGCAAAGGATGATGCGATATTCTTGCATTGTCTTCCAGC
ATACAGAGGGTTCGAAGTAACCTCAGAGGTTATAGACGGTCCGCAATCGAGGGTATTTGATGAGGCAGAAAATAGGCTTC
ACGCTCACAAGGCTATAATGATTTTTGTGTGTGTTGGGAAAATCTGA

Protein sequence :
MRHFLHLNDLSKEDILYLVELASKLKKEAKRGFYFPYLKNKALGLIFTKASTRTRVSFEVGIHQLGGYSLYLGKNDLQLG
RGETIEDTAKVLSRYLDLIVIRTYEQKEVEEFAKYSSIPVINGLTDDYHPTQIIADFQTIFEEKGRLSNLKIAYVGDGNN
VAATLLVGAAKLGLDIAVATPPGYEIKKEVVDFALDEAKKSKSNIIFTYSPKEAVKDADVVYTDTWVSMGQEEEKEKRIR
DFEGYQVDSSLMKLAKDDAIFLHCLPAYRGFEVTSEVIDGPQSRVFDEAENRLHAHKAIMIFVCVGKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 5e-47 41
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-46 41
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-46 41
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-46 41
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-46 41
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-46 41
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-46 41