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Name : sctS (RBRH_03562) Accession : YP_004022633.1 Strain : Genome accession: NC_014718 Putative virulence/resistance : Virulence Product : type III secretion inner membrane protein SctS Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4794 EC number : - Position : 744023 - 744286 bp Length : 264 bp Strand : + Note : Type III secretion inner membrane protein SctS; COG: Type III secretory pathway, component EscS; Pfam: Bacterial export proteins, family 3::PF01313 DNA sequence : ATGGACATCAATACACTGATCCGGCTAACGATGCACGGCATGCTGTTATGCATGTACGTGTCCCTACCGATCGTCAGCGT CGCCGCGGCGGTGGGGTTGGCTGTGTCTTTCCTGCAAGCGATCACATCCATGCAGGACCAGGCGTTGTCTCACGGAGTGA AGCTCATTGCTGTGACGATCGTGATCGTTGTCGGAGCGCCCATGTCCGCCGCCGCGGTACTCAGATTCGCCAACGAAGTG TTCCAGGTTGCCATACCGCAATGA Protein sequence : MDINTLIRLTMHGMLLCMYVSLPIVSVAAAVGLAVSFLQAITSMQDQALSHGVKLIAVTIVIVVGAPMSAAAVLRFANEV FQVAIPQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcS | YP_198719.1 | hypothetical protein | Virulence | Hrp PAI | Protein | 1e-07 | 45 |
| hrcS | YP_362152.1 | HrcS protein | Virulence | Hrp PAI | Protein | 9e-08 | 45 |
| hrcS | NP_640756.1 | HrcS protein | Virulence | Hrp PAI | Protein | 8e-08 | 45 |
| hrcS | BAB07863.1 | HrcS | Virulence | Hrp PAI | Protein | 7e-08 | 45 |
| hrcS | AAD21322.1 | HrcS | Virulence | Hrp PAI | Protein | 7e-08 | 45 |
| hrcS | AAP34350.1 | HrcS | Virulence | Hrp PAI | Protein | 6e-08 | 45 |
| hrcS | NP_636599.1 | HrcS protein | Virulence | Hrp PAI | Protein | 4e-06 | 44 |
| XC_3017 | YP_244085.1 | HrcS protein | Virulence | Hrp PAI | Protein | 4e-06 | 44 |
