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Name : sctV (RBRH_03557) Accession : YP_004022629.1 Strain : Genome accession: NC_014718 Putative virulence/resistance : Virulence Product : type III secretion inner membrane protein SctV Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 739393 - 741477 bp Length : 2085 bp Strand : + Note : COG: Type III secretory pathway, component EscV DNA sequence : ATGTCGAAAGCACTGAAGCTGCCTGCCGCCGGCGAAATCGGCGTCGCCTTGGTCGTGGTGGCAATCATCTCGCTGATGAT CCTGCCGCTTCCGACTCTTTTGATCGATGTGCTGCTGGCATGCAACATCGCAGTCAGCGTCACGTTACTGATGATTACCA TGTACGTACCGGACATCGTAGCGCTATCGGTGTTCCCGTCATTGCTGTTGTTTACGACGCTGTATCGCTTATCGTTGAAT ATCGCATCGACAAAATCCATACTGTTGCACGCCGACGCAGGACATATTATCGAGGCGTTCGGGCAACTGGTCGTCGGAGG CAACCTGGTGGTCGGCCTGGTTGTCTTTGTCATCATCACCACGGTTCAATTTATTGTCATTGCCAAGGGATCGGAGCGCG TAGCGGAAGTCGGCGCCCGGTTTACGCTAGACGCCTTGCCCGGAAAGCAGATGAGCATCGATGCCGATCTCCGGGCCAAT CTGCTCACCGCTGACGAAGCACGCCGAAAACGTGCAACACTGGCCATCGAAAGCCAACTCCATGGAGGCATGGATGGCGC CATGAAGTTCGTCAAGGGCGATGCGATAGCCGGATTAATCATTACCGGAATCAACATCATCGCAGGCATCGCAGTAGGCG TCGCATACCATGGCATGAGTGCCGGGGAAGCAGCCAATCGTTTCTCGGTCTTGTCGGTTGGCGACGCGATGGTCTCGCAG ATTCCGTCGTTGCTTCTGTCAGTTGCTGCCGGCGTCATGATCACCAGGGTGGCCGACGAGCGCGACGCGCATCCTCAATC GCTCGGCAGCGAGATGGGCCGGCAACTCAGTTCAAGCACGCGCGCGCTTTTTTTTGCCGCGATTTTGCTACTAGGCTTCG CCGCCGTCCCGGGCTTTCCCGCTCCGCTGTTCCTACTGCTCTCCGCCATGCTGGCATTTTGCGGTTACAAGCTGAGCCAT AAGCGCCCCCTTTTAGACGAATACCGTAGCGAGCCGGTCGCTTCGATGCAGCGCGCAGGTAGCAAGGGGGACGCAAGCGG CATCCTGCCACGTGCGCCCCAGTTCACGCCTGCAGTGGGCGTAAGGATCGCACCCGACTTGATGCCACGCCTGTCCGCTG CCGCGCTGGACCAGTCATTTGCGTCGGAGCGCAACCAACTCCAGGAGGAGTTGGGCCTGCCTTTTCCGGGTATCACGATG TGGGTGGGCGAGAATACCCGTGCGTCACACTTTGAGATCCTGATACACGACGTGCCATACGTGACAATCGAACTGCCACC CGGCAAGGTCATGTTACCCCCACGCAATGGCGATCTCGACGCCACTCAGGCCGACGCAGTGCTGGCTGCATTGCACGCCC GTGCCGAGCCTAGGGGCGGCCTGGACGGTGGCGCAGGCCCTACTTGGTGGATGGATGAGAAAGCGGTTCCTCCAAAAATC CAGGCATGGCAGGCCGAGCACGTGATCGCTCACAGCGCAATTGCGCTGCTGCGACGTCATGCATCGCTGTTCCTAGGCAT CCAGGAAGTTCAATGGATCCTTGAGCAGCAAGGTAACGAGTACCCTGGACTGGTTGCTGAAGTTCAGAAAGCCGTACCGC CTCAACGTATCGCCGACGTATTGCGGCGTTTGCTGGAAGAACAAGTACCTATCCGCAACATGAGAACGATTCTCGAAAGC CTGCTTGCATGGGGAACGAAAGAAAAGGACATGCTGATGCTCACCGAGTATGTGCGGGGAGACCTTGCGCGGTTTCTCGC CCATCGTGCTGCCGCAGGCGCAGGCCTGCTCCAGGCGGTATTGCTCGACCTGCCCGTTGAGCAACACATCCGTCAAGCGA TTAAGCAGACACCCACCGGTAACTATCTGGCGCTGGCCCCCGACGAGGTAACCTTCCTGGTAAATAAGATCCAATCGTTG GCGGGTACTGACGAGCGTGACGGCGTAGCGCTGGTCACGTCGATGGACATCCGACGCTATGTTCGGCGCATGATAGAGAA TCGTATCAGCTGGCTGCCGGTCTATTCCTATCAGGAACTTGGCGAGCACGTCGAGTTGAAACCGCTCGGTCGGGTAACGG CATAG Protein sequence : MSKALKLPAAGEIGVALVVVAIISLMILPLPTLLIDVLLACNIAVSVTLLMITMYVPDIVALSVFPSLLLFTTLYRLSLN IASTKSILLHADAGHIIEAFGQLVVGGNLVVGLVVFVIITTVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRAN LLTADEARRKRATLAIESQLHGGMDGAMKFVKGDAIAGLIITGINIIAGIAVGVAYHGMSAGEAANRFSVLSVGDAMVSQ IPSLLLSVAAGVMITRVADERDAHPQSLGSEMGRQLSSSTRALFFAAILLLGFAAVPGFPAPLFLLLSAMLAFCGYKLSH KRPLLDEYRSEPVASMQRAGSKGDASGILPRAPQFTPAVGVRIAPDLMPRLSAAALDQSFASERNQLQEELGLPFPGITM WVGENTRASHFEILIHDVPYVTIELPPGKVMLPPRNGDLDATQADAVLAALHARAEPRGGLDGGAGPTWWMDEKAVPPKI QAWQAEHVIAHSAIALLRRHASLFLGIQEVQWILEQQGNEYPGLVAEVQKAVPPQRIADVLRRLLEEQVPIRNMRTILES LLAWGTKEKDMLMLTEYVRGDLARFLAHRAAAGAGLLQAVLLDLPVEQHIRQAIKQTPTGNYLALAPDEVTFLVNKIQSL AGTDERDGVALVTSMDIRRYVRRMIENRISWLPVYSYQELGEHVELKPLGRVTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 4e-85 | 41 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 4e-68 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sctV | YP_004022629.1 | type III secretion inner membrane protein SctV | VFG0064 | Protein | 1e-88 | 43 |
| sctV | YP_004022629.1 | type III secretion inner membrane protein SctV | VFG0384 | Protein | 5e-88 | 42 |
| sctV | YP_004022629.1 | type III secretion inner membrane protein SctV | VFG0198 | Protein | 2e-83 | 41 |
