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Name : sctU (RBRH_03556) Accession : YP_004022628.1 Strain : Genome accession: NC_014718 Putative virulence/resistance : Virulence Product : type III secretion inner membrane protein SctU Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 738291 - 739373 bp Length : 1083 bp Strand : + Note : - DNA sequence : ATGAGCGACGAGAAAACCGAAGAACCGACCGAAAAGCGACTACGTGACGCTCGACGCGACGGTCAAGTAGCAAAAAGCAC TGACTTGACCGACGCTGCAGTTATGTGCGCATCCATCGCCGTACTGGTGGCTGCCGCCAGCATGTTCACCGACGCCTTTC GTGCACTGATCCATACGACGTTGGACTTCGTTACAACGAACCGCAGCAATACGATGTTGGTCGCATCGGCATTCAAGCTC GGTCGCCAATCGTTAACCATCATCGTGCCATGCGTGGCAGCGACGGCGCTCTGCGCGTTCGCCGCACTGTTCGCACAAGT GGGCTTCCAGATCAGCACGAAGCCCGTAACACCGAATCCCACGGCGGTAAACCCTGCAAGCGGAATTAAACGGATATTCT CGCTTCGTACTGTGGTCGATATGACCAAGTCACTGCTCAAGGCGGCGCTGGTCGCCTGCGTCATGTGGTACACGATTCGC GGACTGATACCGCTCATCGCCACCTCGCTGTATCAGCCGCTTCCTGAACTATCGAGACTGTTCTGGACGGTTTTGCTCAA GCTATTCTCTGCCGCCGCGCTGGTCTTCATTGTGATTGCGGCGCTCGACTTCAAGCTGCAAAAATTTCTTTTCACGCGGC AAATGCGCATGAGCAAAGACGAAATCAAGCGAGAGTACAAGCAGCAGGAAGGCGATCCTCAACTCAAAGGCGAGCGCAAG CGCATCGCGCGAGAGTGGGCACAGGAGGCACCACCGAGGCTGCGCGTCGGCCTTGCAAACGCACTCATCGTCAATCCAAC TCACTATGCCGTAGCAATTCGCTACGCGCCCGAAGAATGTCCACTGCCCGTCGTGATCGCAAAGGGCCACGATGAGAGCG CTGCCGAATTAAGGCGGTACGCTGCGCAAGCACGCGTGCCGATCATTGGCAATCCGCCAATCGCCCGCGCGCTGCACCGC GTGAAGATCGACGAGCCTATTCCAGAAGCACTGTTCGAAGCAGTTGCAGCCATCCTGCGTTGGGTCGACTCCCTCGGCCC CAGGCAGACAGACTCTGGCAACGCTGCCACTTCGACACACTGA Protein sequence : MSDEKTEEPTEKRLRDARRDGQVAKSTDLTDAAVMCASIAVLVAAASMFTDAFRALIHTTLDFVTTNRSNTMLVASAFKL GRQSLTIIVPCVAATALCAFAALFAQVGFQISTKPVTPNPTAVNPASGIKRIFSLRTVVDMTKSLLKAALVACVMWYTIR GLIPLIATSLYQPLPELSRLFWTVLLKLFSAAALVFIVIAALDFKLQKFLFTRQMRMSKDEIKREYKQQEGDPQLKGERK RIAREWAQEAPPRLRVGLANALIVNPTHYAVAIRYAPEECPLPVVIAKGHDESAAELRRYAAQARVPIIGNPPIARALHR VKIDEPIPEALFEAVAAILRWVDSLGPRQTDSGNAATSTH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | NP_636604.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 5e-65 | 47 |
| XC_3012 | YP_244080.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 5e-65 | 47 |
| hrcU | AAP34345.1 | HrcU | Virulence | Hrp PAI | Protein | 4e-65 | 45 |
| hrcU | NP_640761.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-66 | 45 |
| hrcU | BAB07858.1 | HrcU | Virulence | Hrp PAI | Protein | 2e-68 | 45 |
| hrcU | YP_198724.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 6e-68 | 45 |
| hrcU | YP_362157.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-65 | 44 |
