Gene Information

Name : RBRH_02804 (RBRH_02804)
Accession : YP_004022545.1
Strain :
Genome accession: NC_014718
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : 3.6.3.12
Position : 630188 - 632326 bp
Length : 2139 bp
Strand : -
Note : Potassium-transporting ATPase B chain (EC 3.6.3.12); COG: High-affinity K+ transport system, ATPase chain B; Pfam: E1-E2 ATPase::PF00122
haloacid dehalogenase-like hydrolase::PF00702

DNA sequence :
ATGACTAACGTCAATCCATCGCCTGCCCATCGCGCGGACAACCTCGGGCAGGCCCGTACCGCGGTCCATTCGATGTTCGA
TCCGGTGCTACTCAAGCCGGCCATCGTCGATGCGTTCAAGAAGCTCGCGCCGCGGACTCAACTGCGCAATCCGGTAATGT
TCTGTGTCTACGTGGGCAGCATCCTGACCACAGTGCTGTGGATCGCGGCGCTTGCCGGGCAGGCCGAGGCGCCGGCCGGC
TTCATTTTGGCCATTGCGTTGTGGTTGTGGTTCACGGTGCTGTTTGCCAACTTCGCCGAGGCGTTGGCGGAGGGCCGCTC
GAAGGCCCAGGCCGCGTCGCTGCGCAGCGCCAAGCACAATGTGATGGCCAAGAAGCTGAACGAGCCTCACCCGAAAGCGC
CGATCCGTATCATAACGTCCACGGATTTGCGCCGCGGCGACGTGGTGTTGGTCGAGGCGGGTGACACGATTCCGGCGGAC
GGCGAAGTCATTGAAGGCGTCGCGTCGGTCGACGAGTCGGCGATTACCGGTGAATCGGCACCCGTCATCCGCGAGTCTGG
CGCAGACTTCTCGTCCGTCACCGGCGGCACACGGGTGCTGTCGGACTGGATCGTGGTGCGGGTCAGCGTGAATCCCGGCG
AGGCCTTCCTGGACCGGATGATCGCGATGGTCGAGGGCGCGAAGCGACAAAAGACGCCCAATGAAATCGCGTTGACCATC
CTGCTAGTGGCGTTGACGCTCGTGCTGCTGTTCGCGACCGCGACGCTGTTGCCATTCTCGATGTTCTCGATCTCCGCGAT
GAAATCCGGTCACGTCGTGACGATCACGGTTCTGGTCGCGTTGCTGGTGTGCCTGATACCGACCACGATCGGTGGATTGC
TGTCGGCGATCGGGGTGGCCGGCATGAGCCGGATGATGCAGGCGAACGTGATCGCCACGTCCGGCCGCGCCGTTGAGGCT
GCCGGCGACGTCGACGTGCTGTTGCTGGACAAGACCGGCACGATTACGCTTGGCAACCGGCAGGCGTCGGCGTTCATGCC
GGCACCGGGCGTGTCCGAGCAGGAGCTGGCCGATGCCGCACAGTTGGCGTCGCTGGCCGACGAGACGCCGGAAGGCCGCA
GCATCGTGGTCCTTGCCAAACAGCGTTTCAACATTCGCGAGCGGGATATGGCCAGCCTGCATGCGCAGTTCCTCGGTTTC
ACTGCGCAGACGAGGATGAGCGGCGTTGATCTGCCGGAGCGCGAGATCCGTAAGGGTGCGGCTGACGCGATCCAGCAGTA
TGTCCAGGCGCATGCAGGGCGCTTTCCTCAGGAAGTGCGCGCGGCGGTCGATGACGTAGCACGCCGCGGCAGTACGCCGC
TGGTCGTCGCGCAGCGGCAGCTAGGCGCTGGTGGCCAAGCCCGCGTGCTCGGCGTGATCGAGCTAAAGGACATCGTCAAA
GGTGGGATCAAGGAGCGCTTTGCCGAGTTGCGCAAGATGGGGATCAAGACGGTGATGGTGACTGGCGATAATCGCCTCAC
CGCGGCAGCGATTGCCGCCGAGGCCGGCGTCGATGATTTTTTGGCCGAGGCCACGCCAGAAACCAAGCTTGCGACCATCC
GCGCGTACCAAGCCGACGGGCGGCTGGTGGCGATGACCGGCGATGGCACGAACGACGCCCCGGCGCTGGCGCAGGCCGAC
GTCGCGGTCGCGATGAACACCGGCACGCAGGCGGCAAAGGAAGCGGGCAACATGGTCGATCTCGACTCGAATCCGACCAA
GCTGATCGAGATCGTGGAGATCGGCAAGCAAATGTTGATGACGCGCGGCTCGCTGACCACGTTCTCGATCGCCAACGATG
TAGCGAAGTACTTCGCGATCATTCCGGCGGCCTTCGCGACCACCTATCCGCAGTTGCACGTGCTCGACGTGATGCGGCTC
ACTTCGCCTTCCTCCGCCATTTTGTCGGCGGTGGTGTTCAACGCGCTGATCATCGTGTTTCTAATTCCGCTCGCGCTAAA
GGGGGTTAAGTACCGGCCGCTGGGTGCCGCTTCGCTGCTGCGGCGCAATCTGTTGATCTATGGGTTGGGTGGCATTGTGC
TGCCGTTCCCGTTCATCAAGTTGATCGATATGGCGATCACGGCCCTGGGCTGGGCCTGA

Protein sequence :
MTNVNPSPAHRADNLGQARTAVHSMFDPVLLKPAIVDAFKKLAPRTQLRNPVMFCVYVGSILTTVLWIAALAGQAEAPAG
FILAIALWLWFTVLFANFAEALAEGRSKAQAASLRSAKHNVMAKKLNEPHPKAPIRIITSTDLRRGDVVLVEAGDTIPAD
GEVIEGVASVDESAITGESAPVIRESGADFSSVTGGTRVLSDWIVVRVSVNPGEAFLDRMIAMVEGAKRQKTPNEIALTI
LLVALTLVLLFATATLLPFSMFSISAMKSGHVVTITVLVALLVCLIPTTIGGLLSAIGVAGMSRMMQANVIATSGRAVEA
AGDVDVLLLDKTGTITLGNRQASAFMPAPGVSEQELADAAQLASLADETPEGRSIVVLAKQRFNIRERDMASLHAQFLGF
TAQTRMSGVDLPEREIRKGAADAIQQYVQAHAGRFPQEVRAAVDDVARRGSTPLVVAQRQLGAGGQARVLGVIELKDIVK
GGIKERFAELRKMGIKTVMVTGDNRLTAAAIAAEAGVDDFLAEATPETKLATIRAYQADGRLVAMTGDGTNDAPALAQAD
VAVAMNTGTQAAKEAGNMVDLDSNPTKLIEIVEIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFATTYPQLHVLDVMRL
TSPSSAILSAVVFNALIIVFLIPLALKGVKYRPLGAASLLRRNLLIYGLGGIVLPFPFIKLIDMAITALGWA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 3e-166 62
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-166 62
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 7e-133 54
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 5e-132 53
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 3e-132 53
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 5e-132 53
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 5e-132 53
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 5e-132 53