Gene Information

Name : RBRH_01875 (RBRH_01875)
Accession : YP_004022508.1
Strain :
Genome accession: NC_014718
Putative virulence/resistance : Resistance
Product : Quaternary ammonium compound-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 587996 - 588328 bp
Length : 333 bp
Strand : -
Note : Quaternary ammonium compound-resistance protein; COG: Membrane transporters of cations and cationic drugs; Pfam: Small Multidrug Resistance protein::PF00893

DNA sequence :
ATGCTTGCCTACTTGTATCTCGCGATTGCAATCGTCGCCGAAGTGATCGGCACGTCGGCGCTCAAGGCGTCCGATGGTTT
TACGCGGCTGCTGCCGTCGGTGATCACTGCGCTCGGCTACGCGGTCGCGTTCTACTGCCTGTCCCTGACGTTGCGTTCGG
TGTCGGTCGGCATTGCCTATGCGATCTGGTCGGGAGTCGGCATTGTATTGATTTCGCTGGTTGCGTTCTTCGTCTACGAT
CAGCGGCTCGATTGGCCGGCGGTGACCGGCATGGGGTTCATCGTCGCCGGCGTCGTGTTGATGAACGGCTTTTCGAAGAC
CGCTGCTCACTAG

Protein sequence :
MLAYLYLAIAIVAEVIGTSALKASDGFTRLLPSVITALGYAVAFYCLSLTLRSVSVGIAYAIWSGVGIVLISLVAFFVYD
QRLDWPAVTGMGFIVAGVVLMNGFSKTAAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 9e-18 52
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 9e-18 52
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 9e-18 52
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 9e-18 52
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 9e-18 52
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 9e-18 52
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 1e-17 52
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 9e-18 52
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 9e-18 52
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 9e-18 52
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 1e-17 52
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 9e-18 52
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 9e-18 52
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 9e-18 52
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 1e-17 52
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 9e-18 52
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 9e-18 52
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 9e-18 52
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 1e-17 52
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 9e-18 52
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 9e-18 52
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 9e-18 52
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 1e-17 52
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 9e-18 52
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 9e-18 52
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 9e-18 52
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 9e-18 52
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 9e-18 52
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 9e-18 52
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 9e-18 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RBRH_01875 YP_004022508.1 Quaternary ammonium compound-resistance protein BAC0377 Protein 6e-26 61
RBRH_01875 YP_004022508.1 Quaternary ammonium compound-resistance protein BAC0002 Protein 2e-20 59
RBRH_01875 YP_004022508.1 Quaternary ammonium compound-resistance protein NC_010410.6003348.p0 Protein 2e-20 59
RBRH_01875 YP_004022508.1 Quaternary ammonium compound-resistance protein BAC0324 Protein 1e-20 57
RBRH_01875 YP_004022508.1 Quaternary ammonium compound-resistance protein BAC0322 Protein 2e-21 56
RBRH_01875 YP_004022508.1 Quaternary ammonium compound-resistance protein NC_002695.1.913273.p Protein 2e-16 56
RBRH_01875 YP_004022508.1 Quaternary ammonium compound-resistance protein BAC0150 Protein 2e-16 55
RBRH_01875 YP_004022508.1 Quaternary ammonium compound-resistance protein CP001138.1.gene1489. Protein 6e-22 54
RBRH_01875 YP_004022508.1 Quaternary ammonium compound-resistance protein CP004022.1.gene1549. Protein 9e-21 53
RBRH_01875 YP_004022508.1 Quaternary ammonium compound-resistance protein BAC0323 Protein 4e-18 52
RBRH_01875 YP_004022508.1 Quaternary ammonium compound-resistance protein BAC0192 Protein 4e-15 46
RBRH_01875 YP_004022508.1 Quaternary ammonium compound-resistance protein BAC0325 Protein 3e-12 42