Gene Information

Name : RBRH_03038 (RBRH_03038)
Accession : YP_004022310.1
Strain :
Genome accession: NC_014718
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein thiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 369776 - 371707 bp
Length : 1932 bp
Strand : +
Note : Thiamine biosynthesis protein thiC; COG: Thiamine biosynthesis protein ThiC; Pfam: ThiC family::PF01964

DNA sequence :
ATGGTTGCCAATCCAAAGTTTCTGTCCGAGTCCGCGCGCGTGGACGATGCCGCGATCGCGCCGCTGCCGAATTCCCGCAA
GATCTATGTGACCGGCTCCCGGTCTGACCTACGGGTTCCGATGCGCGAAATCAGCCAGGCCGACACGCCGACCGGCTTCG
GTGGTGAGAAAAACCCGCCCATCACGGTCTATGACACATCCGGCCCATATACCGACCCCGACGTCAGGATCGATATTCGC
GCCGGCCTGCCCGCGCTACGCGAGGCCTGGATCGAGGAACGCGGCGACACCGAGCGGCTGGAAGGGCTCTCGAGCCAGTA
CGGCCAGGCCCGCGCGGCCGACGCGGACACCGCGCACCTCCGCTTCCCAGGCCTGCATCGCGCGCCGCGGCGAGCCAAGG
CGGGCGCCAACGTGACCCAGATGCACTACGCGCGCCGCGGCATCATCACGCCGGAAATGGAGTTCATTGCGATCCGCGAA
AACCAGCGTCGCCACGAGTATTTGGAAAGTCTGCGCGCTAGCGGACCACAAGGCGCCAAGCTGGCCGAGCTGATCGGTCG
GCAGCACCGTGGCAACGCATTCGGCGCGGCGGCATTCAGTGGCACCCAGGCTCGCGAAATCACCCCCGAATTCGTGCGCG
ACGAAGTCGCACGCGGTCGCGCGATCATTCCGGCCAACATCAATCATCCCGAATCCGAGCCGATGATCATCGGCCGCAAC
TTCCTGGTGAAGGTCAATGCAAACATCGGCAACTCCGCTGTCACGTCATCGATCGGCGAGGAAGTCGACAAGATGACGTG
GGCGATCCGCTGGGGCGGCGATACCGTGATGGACTTGTCCACCGGCAAGAACATCCACGAGACGCGCGAGTGGATCATCC
GCAACAGCCCGGTGCCGATTGGTACCGTGCCGATCTACCAGGCGCTGGAGAAAGTTCACGGCAAGGCGGAGGAACTGACC
TGGGAAATCTTCCGCGACACGCTGATCGAGCAGGCTGAACAAGGCGTTGATTACTTCACGATTCATGCCGGCGTGCTGCT
GCGCTATGTACCGATGACTGCGAGCCGCATGACGGGGATTGTCTCGCGCGGCGGCTCGATCATGGCCAAGTGGTGTCTTG
CCCATCACCGAGAAAGCTTCCTGTACGAGCATTTCGAAGACATCTGCGAGATCATGAAGGCGTACGACGTGAGCTTCTCG
CTGGGCGACGGGTTACGGCCAGGCTCGATCTACGATGCAAACGACGAGGCGCAGCTCGCCGAACTCAAGACGCTGGGCGA
GTTGACGCAGATTGCATGGAAGCACGATGTGCAGACAATGATTGAAGGTCCGGGACACGTGCCGATGCAGTTGATCAAGG
AAAACATGGACTTGCAGCTGGAGTGGTGCAACGAGGCGCCGTTCTATACGCTCGGGCCGCTGACTACCGACATCGCACCG
GGATACGACCATATTACCTCGGGCATCGGCGCGGCGATGATCGGCTGGTTTGGTACCGCGATGCTGTGCTACGTGACGCC
AAAGGAGCACTTGGGGTTGCCGAACAAAGACGACGTCAAAGAAGGCATCATCACGTACAAGCTTGCCGCGCACGCCGCCG
ACCTTGCGAAGGGGCATCCCGGCGCGCAGATACGTGACAACGCGTTGTCGAAGGCCCGCTTCGAGTTCCGTTGGGAGGAT
CAGTTCAACCTCGGACTCGACCCGGACAAGGCGCGCGAATTTCACGACGAGACACTACCGAAGGATTCCGCAAAGGTTGC
CCACTTCTGCTCGATGTGCGGCCCGCATTTCTGTTCGATGAAGATCACGCAGGACGTGCGTGAGTTTGCCGAGAAGCAAG
GTGTCGGCGAAGTGGAGGCGCTGCGCAAGGGCATGGAAGTCAAGGCGATCGAGTTCAAGCAGTCGGGCGCCGAGATCTAC
CAAAAGCAGTAA

Protein sequence :
MVANPKFLSESARVDDAAIAPLPNSRKIYVTGSRSDLRVPMREISQADTPTGFGGEKNPPITVYDTSGPYTDPDVRIDIR
AGLPALREAWIEERGDTERLEGLSSQYGQARAADADTAHLRFPGLHRAPRRAKAGANVTQMHYARRGIITPEMEFIAIRE
NQRRHEYLESLRASGPQGAKLAELIGRQHRGNAFGAAAFSGTQAREITPEFVRDEVARGRAIIPANINHPESEPMIIGRN
FLVKVNANIGNSAVTSSIGEEVDKMTWAIRWGGDTVMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVHGKAEELT
WEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTASRMTGIVSRGGSIMAKWCLAHHRESFLYEHFEDICEIMKAYDVSFS
LGDGLRPGSIYDANDEAQLAELKTLGELTQIAWKHDVQTMIEGPGHVPMQLIKENMDLQLEWCNEAPFYTLGPLTTDIAP
GYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNKDDVKEGIITYKLAAHAADLAKGHPGAQIRDNALSKARFEFRWED
QFNLGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQDVREFAEKQGVGEVEALRKGMEVKAIEFKQSGAEIY
QKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 74
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 74
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 73