Gene Information

Name : RBRH_00446 (RBRH_00446)
Accession : YP_004022044.1
Strain :
Genome accession: NC_014718
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 107492 - 108421 bp
Length : 930 bp
Strand : -
Note : Transposase; COG: Transposase and inactivated derivatives; Pfam: Integrase core domain::PF00665

DNA sequence :
GTGCTATCTCCGTATGGAGAACGCCTATCTAAAAAAGCTGAAGGCCTTGGCTCAAGCGAGCGAGCTGTCAGCACGAGAGA
GAGAACGCAAATCGTGCTTGAGCTGAGGCAACAATATCCGCTTGCAGGCCTTCTGAAGGTAGCTGGACTTGCGCGCAGCA
CTTTCTATTACCAGCAGAAGGCATTGCAGATGGCCGATAAGTATGCTGATCTGAAAGTGAAGGTTCGCACACTGTTCGAT
CAACACACGGGGCAGTATGGCTATCGGCGGATCACGGCCGTCATCCGGCGGGACGGTCAACTGATCAATCACAAGATCGT
TCGACGATTGATGGCCCAGTTGCAATTGAGATCCTGTGTTCGGGTGAAGATGTATCGCGTCTACAGAGGACAGCTCGGTC
ACGTAGCGCCCAATGTACTGGAGCGCAGGTTCGAGGCGAGCCGTCCGAACGAGAAGTGGGTGACGGACGTCACGGAGTTC
AACGTGGGCGGTCAGAAGCTGTATCTGTCGCCAATCATGGATCTCTACAATGGCGAAATCCTGTCGTATAAGATGGCCAA
GCGTCCCTTGTTCAATATGGTGAGCGCGATGCTAGAAAAGGCGTTCAACCGGCTGAGACCCGGCGATAAGCCAGTCCTGC
ATTCCGACCAGGGCTGGCAGTATCGGATGCCAGAATATCGACGCCGCCTTGAAGAGCGGGCTATTACCCAAAGCATGTCC
CGCAGAGGAAACTGCCTCGACAATGCAGCCATTGAAAGCTTCTTCGGTACGCTCAAGTCAGAGTTCTACTATCTCAATGA
ATTCCGCAACGTCGAGGAGTTACAAACCGGCATCGACAACTACATCAGGTACTACAATCACGACCGTATCAAGGTCAAAT
TGCGGGGACTCAGCCCGGTCGAGTACCGAACTCGATTTGCGCAGGCCTAG

Protein sequence :
MLSPYGERLSKKAEGLGSSERAVSTRERTQIVLELRQQYPLAGLLKVAGLARSTFYYQQKALQMADKYADLKVKVRTLFD
QHTGQYGYRRITAVIRRDGQLINHKIVRRLMAQLQLRSCVRVKMYRVYRGQLGHVAPNVLERRFEASRPNEKWVTDVTEF
NVGGQKLYLSPIMDLYNGEILSYKMAKRPLFNMVSAMLEKAFNRLRPGDKPVLHSDQGWQYRMPEYRRRLEERAITQSMS
RRGNCLDNAAIESFFGTLKSEFYYLNEFRNVEELQTGIDNYIRYYNHDRIKVKLRGLSPVEYRTRFAQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 6e-86 57
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 4e-72 51
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 6e-57 48
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 5e-57 48
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 1e-55 46
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 2e-56 46