Gene Information

Name : FraEuI1c_7074 (FraEuI1c_7074)
Accession : YP_004020909.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 8638452 - 8639204 bp
Length : 753 bp
Strand : -
Note : KEGG: sma:SAV_3634 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGCCCGCCCCGGCGATCGCGGCCTTGGAGACCAGGGACCTCACCCGAATATTCGGTCAAGGCGCCGAAGCGGTGCCCGC
GCTCGCGGGCGTCGACCTGACGGTCCCGCGGGGGACATTCACCGCGTTGATGGGTCCTTCCGGTTCGGGAAAGTCCACCT
TCCTCGCCTGCGTCGGCGGGGTCGAACGGCCGACCGGCGGCCGGGTGCTGGTCGCCGGCGCCGACGTCACCGACTGGGAC
GAGGACCGGCGGACCCGGCTGCGCCGCGACCGGATCGGGTTCGTCTTCCAGGACTTCCACCTCATGCCGTACCTGACGGC
CGAGCAGAACGTCGGCCTGCCCCGCCGCCTGGCCGGGCGCCGCCCCGACCGGGCCCTGGTGCGTGGCCTGCTCGACCAGG
TCGGCCTCGCCGATCGGGCGGGCCAGTTGCCGGCGCGGCTGTCCGGCGGCCAGCGGCAGCGGGTCGCGATCGCGCGTGCC
CTGGTCAACGACCCGGCGATCGTCCTGGCCGACGAGCCGACCGGCGCGCTCGACTCGACGACGGCCCGCGAGGTCCTCAC
CCTGCTGCGCTCCTGCGTCGACGACCTGGGCCAGACCCTCGTCATGGTCACCCATGACCCGATCGCCGCCGCCCACGCCG
ACTCCGTGGTCTTTCTTGTCGATGGCCGGGTCGCGGGCCGCATCGACTCGCCAACCGTCGAGTCCGTGTCCGCCCAGCAG
ACCCACCTTGACGGCCTGGCGGTGCGGTCATGA

Protein sequence : 
MPAPAIAALETRDLTRIFGQGAEAVPALAGVDLTVPRGTFTALMGPSGSGKSTFLACVGGVERPTGGRVLVAGADVTDWD
EDRRTRLRRDRIGFVFQDFHLMPYLTAEQNVGLPRRLAGRRPDRALVRGLLDQVGLADRAGQLPARLSGGQRQRVAIARA
LVNDPAIVLADEPTGALDSTTAREVLTLLRSCVDDLGQTLVMVTHDPIAAAHADSVVFLVDGRVAGRIDSPTVESVSAQQ
THLDGLAVRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-24 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-38 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-38 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FraEuI1c_7074 YP_004020909.1 ABC transporter NC_008702.1.4606598. Protein 4e-32 48
FraEuI1c_7074 YP_004020909.1 ABC transporter NC_012469.1.7686878. Protein 1e-37 44
FraEuI1c_7074 YP_004020909.1 ABC transporter CP001581.1.gene798.p Protein 3e-40 44
FraEuI1c_7074 YP_004020909.1 ABC transporter CP001581.1.gene598.p Protein 5e-39 41