Gene Information

Name : FraEuI1c_7001 (FraEuI1c_7001)
Accession : YP_004020838.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Unknown
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 8554024 - 8554701 bp
Length : 678 bp
Strand : -
Note : KEGG: sro:Sros_0609 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR

DNA sequence :
ATGACCGCCCCCGCGGGCCGGACGGTCCGGGTGCTGGTCGCCGACGACCAGGAGATCGTCCGGACCGGCCTGCGCATGAT
CCTCGACGCCCAGCCGGGCATCGAGGTCGTCGGGGAGGCCGCCGACGGGCTGGCCGCCGTCGAGCTCGCCCGCCGGTTGC
GCCCCGACGTGTGCCTGTTCGACATCCGGATGCCGGGCCTGGACGGCATCGAGGCGACGGCCCGGCTCGCCGGCCCGGGC
GTGGCCGACCCGGTCGCCGTCGTCGTGATCACGACGTTCGACCTCGACGAGTACGTCTACGCCGCGCTGCGGGCCGGCGC
CAGGGGCTTCCTGCTGAAGGACGCCGGCCCGGACCTGCTCGCCCAGGCCGTCCAGGCCGCGGCGTCCGGTGACGCGCTGA
TCGCCCCGGCCGTCACGGCCCGGCTTTTGGCCGCCTTCGCCGACGCCGGCCCGGGCCGCCCGCCGCGTCAGCCCGTCGAG
CCCCTGACGGGCCGCGAGGAGCAGGTGCTCGCGGCGGTGGCCCGCGGCCGGACCAACAACGAGATCGCCGCCGAGCTCTA
CATCACGCTGAGCACGGTCAAGACGCACGTCGCCAGCCTGATGGCGAAACTCGCCGCCAGGAACCGCGTCGAGATCGCCA
TCTGGGCCTACGAGACCCGGCGGGTCCGGCCCGGGTGA

Protein sequence :
MTAPAGRTVRVLVADDQEIVRTGLRMILDAQPGIEVVGEAADGLAAVELARRLRPDVCLFDIRMPGLDGIEATARLAGPG
VADPVAVVVITTFDLDEYVYAALRAGARGFLLKDAGPDLLAQAVQAAASGDALIAPAVTARLLAAFADAGPGRPPRQPVE
PLTGREEQVLAAVARGRTNNEIAAELYITLSTVKTHVASLMAKLAARNRVEIAIWAYETRRVRPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 6e-19 43