Gene Information

Name : FraEuI1c_6824 (FraEuI1c_6824)
Accession : YP_004020663.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 8348947 - 8349840 bp
Length : 894 bp
Strand : +
Note : KEGG: cwo:Cwoe_4805 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGACTACGACGGACCCGAAGACCACAATCGAACCGATTCTCGTCATCACCGCGCTGAAAAGGTCCTTTGGCCGCGGCGA
GCGAGCCAGGCCGGCGCTGTGCGGGGTATCCCTGAGCGTCACGCCGGGCGAGTGGGTCGCCGTCGTCGGCCCGAGTGGCT
GTGGCAAGTCGACGCTGCTGCACCTGGTCGGCGGCCTGGACACCCCGGACGCCGGCTCGATCCGGATCGGCGGCGACGAG
GTGACCACCCTCTCGGCGGCCCGGCGGGCCCTGCTGCGCCGGCGCAGGGTCGGCTTCGTCTTCCAGGCCTACAACCTGGT
GCCGCACCTGAACGCGGCCGCGAACGTCGAGCTCGGCCTGCGGGTGGCCGGCGTCGGCCGGCGGGCCGCGAAGGCCCGCG
CCGCCGAGGTGCTCGACGCCGTCGGTCTGGGCGACCTCCTGCACGCGCTGCCCGCGACGCTGTCCGGCGGCCAGCAGCAG
CGGGTGGCGATCGCCCGCGCGATCGCCACCAGACCCGACCTGGTGCTGGCCGACGAGCCCACCGGCGCGCTGGACACGGC
CGCCTCCCGCCGCGTCGTCGAGCTGCTTCGTGAGGAGCACCGGCGTGGCCAGACCCTGATCATGGTGACCCACGACTACG
CCGTCGCCGCCGCCGCCGACCGGGTCATCTTCCTGCGCGACGGCCAGATCATCGACGAGCGCCGGCCCGCCGGCCGCCGC
ACCAGCGACGCTTCTCCCACCGGCCCGAGCGGCGCGCTCGACGAGGCCGACGCCGACGAGACCGCGCTCCACGAGACGGC
CGACGAGCTCGCCGACGAGGACGGCGGCCACGGGACGCGACGGGCGCCAGGCGGCAGCGACCTCAACGACCTGCTCGGGC
TGGGGAGCTGGTGA

Protein sequence : 
MTTTDPKTTIEPILVITALKRSFGRGERARPALCGVSLSVTPGEWVAVVGPSGCGKSTLLHLVGGLDTPDAGSIRIGGDE
VTTLSAARRALLRRRRVGFVFQAYNLVPHLNAAANVELGLRVAGVGRRAAKARAAEVLDAVGLGDLLHALPATLSGGQQQ
RVAIARAIATRPDLVLADEPTGALDTAASRRVVELLREEHRRGQTLIMVTHDYAVAAAADRVIFLRDGQIIDERRPAGRR
TSDASPTGPSGALDEADADETALHETADELADEDGGHGTRRAPGGSDLNDLLGLGSW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-18 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-20 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-20 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-20 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FraEuI1c_6824 YP_004020663.1 ABC transporter NC_008702.1.4606598. Protein 5e-20 49
FraEuI1c_6824 YP_004020663.1 ABC transporter CP001581.1.gene598.p Protein 3e-25 44
FraEuI1c_6824 YP_004020663.1 ABC transporter NC_012469.1.7686878. Protein 2e-23 44
FraEuI1c_6824 YP_004020663.1 ABC transporter CP001581.1.gene798.p Protein 4e-23 44
FraEuI1c_6824 YP_004020663.1 ABC transporter NC_012469.1.7685735. Protein 7e-18 41