Gene Information

Name : FraEuI1c_6806 (FraEuI1c_6806)
Accession : YP_004020645.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 8331669 - 8332388 bp
Length : 720 bp
Strand : -
Note : KEGG: sti:Sthe_0964 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGGAACCGGCGCAGGAGCGGGCCGCCGAGCCGGTCGTGGCCGTGGTGGGCGCGTACCGGACCTTCAACGCCGAGGCCGC
GCCGGTCCGCGCGCTGCGTGGCGCCTCGCTGACGGTCTGGCCGGGCGAGTTCGTCGCCGTCACCGGGCCCTCGGGCAGCG
GGAAGTCGACTCTCCTCAACATCATCGCGGGCCTGGAGCGGGCCGACGGCGGCTCCGTCGTGGTCGCCGGGCAGTCACTC
GCCGAGCTGTCCGAGACCCGGCTCGCCCGGCTGCGCCGCCGCCACGTCGGCATGGTCTTCCAGTTCTTCCACCTGCTGGA
GAGCATGACGGCGGCCGACAACGTGGTGCTGGCCGCCCGGCTCGCGGGCCTGGGCCGGCGGGCCGCCGTGGACCGCGCGC
GCGAGCTGCTCGACGTGCTGGGCCTGCTGGAGCGGGCCGAGGCGTTGCCGGCCACGCTGTCCGGCGGCCAGCGGCAACGG
CTCGCGATCGCCCGGGCGCTCGCGGGCGGCCCGACCCTGTTGCTCGCCGACGAACCGACCGGCGCGCTCGACTCGGCCGG
CGCGGCCGAGGTGCTCGACCTGTTCACCCGGCTGCACGCCCGCGGCCAGACCATCGTCGTGGTCACCCACGACGCCGCCG
TCGCCGCCGGCGCGCAGCGCATCGTCGCCATGCGCGACGGGCAGATCGAGCAGCCGGTGCCGGCAGAGGAGACCGGGTGA

Protein sequence : 
MEPAQERAAEPVVAVVGAYRTFNAEAAPVRALRGASLTVWPGEFVAVTGPSGSGKSTLLNIIAGLERADGGSVVVAGQSL
AELSETRLARLRRRHVGMVFQFFHLLESMTAADNVVLAARLAGLGRRAAVDRARELLDVLGLLERAEALPATLSGGQRQR
LAIARALAGGPTLLLADEPTGALDSAGAAEVLDLFTRLHARGQTIVVVTHDAAVAAGAQRIVAMRDGQIEQPVPAEETG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-20 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-19 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-19 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-19 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FraEuI1c_6806 YP_004020645.1 ABC transporter NC_008702.1.4606598. Protein 2e-22 48
FraEuI1c_6806 YP_004020645.1 ABC transporter NC_012469.1.7686878. Protein 5e-28 43
FraEuI1c_6806 YP_004020645.1 ABC transporter CP001581.1.gene798.p Protein 4e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FraEuI1c_6806 YP_004020645.1 ABC transporter VFG2059 Protein 3e-06 42