Gene Information

Name : FraEuI1c_6724 (FraEuI1c_6724)
Accession : YP_004020563.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 8226089 - 8227264 bp
Length : 1176 bp
Strand : +
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: fal:FRAAL0783 cystathionine gamma-synthase, PLP-dependent

DNA sequence : 
GTGACCGCCGACCACGACTACACCGGGCGGGGCTTCGAGACGGTCGCGGTGCACGCCGGCCAGGAGCCGGACCCGGCGAC
CGGTGCCGTCGTCGTGCCGATCCATCCGGCCTCGACCTTCGCGCAGGACGGGATCGGCGGCCTGCGAGCCGGCTTCGAGT
ACGCCCGCTCCGGCAACCCGACGCGGGCCGCGCTCGAGACGTCGCTCGCCGCGCTCGAGGGCGGCCGGGTCGGCCTCGCG
TTCTCCTCCGGGCTGGCCGCGGAGGACGCGGTGCTGCGCGCGGTCTGCCGCCCCGGCGACCACGCGCTCATCCCGGCCGA
CGCCTACGGCGGCACCTACCGGCTGTTCCACCGCGTCTACGCCGACTGGGGCCTGGACTACACGCCCGTCGACCTGGCCG
ACCCGGCCGCGGTCCGCGCCGCGTTGCGCGCGGGGCGGACGCGGCTGATCTGGTGCGAGACCCCGACGAACCCGCTGCTG
TCGATCGCGGACATCGCGGTGCTCGCCGAGCTGGCGCACGCGGCGGGTGCGCTGCTCGTCGTCGACAACACGTTCGCCTC
GCCCTATCTCCAGCGCCCGCTCGCGCTCGGCGCGGACGCCGTCGTGCACTCGACCACCAAGTACCTCGGCGGGCACAGCG
ACGTCGTTGGCGGGGCGGTCGTCGTCGCGGACCCCGAGCTGGGCGGGCGGATCGCGTTCGTCCAGAACGCCGCCGGCGCC
GTGCCAGGGCCGTTCGACGCCTGGCTGGTGCTGCGGGGGATCAAGACGCTGCCCGTCCGGATGGACCGGCACTGCGCGAA
CGCCGCCCGCGTCGCCGAGCTGCTCGGTGGCCATCCCGGCGTCGCGGAGGTGCGCTATCCGGGCCTGCCGACGCACCCGG
GGCACGCGGTCGCGGCGCGGCAGATGTCCGGGTTCGGCGGCATGGTGTCGTTCCGGGTCCGCGCCGGGGCCGATGCGGCG
GCCGAGGTCTGCCGCCGGGCCAGGCTGTTCACCCTCGCGGAGTCGCTGGGCGGGGTGGAGTCGCTGATCGAGCATCCGGG
CCGGATGACGCACGCCTCCGCCGCCGGCTCGCCGCTGGCGGTGCCCGACGACCTGGTTCGGCTCTCGGTCGGGATCGAGT
CGGCCGACGACCTTCTCGCTGATCTGCGCCAGGCCCTCGACGCGGCCCTCGCCTGA

Protein sequence : 
MTADHDYTGRGFETVAVHAGQEPDPATGAVVVPIHPASTFAQDGIGGLRAGFEYARSGNPTRAALETSLAALEGGRVGLA
FSSGLAAEDAVLRAVCRPGDHALIPADAYGGTYRLFHRVYADWGLDYTPVDLADPAAVRAALRAGRTRLIWCETPTNPLL
SIADIAVLAELAHAAGALLVVDNTFASPYLQRPLALGADAVVHSTTKYLGGHSDVVGGAVVVADPELGGRIAFVQNAAGA
VPGPFDAWLVLRGIKTLPVRMDRHCANAARVAELLGGHPGVAEVRYPGLPTHPGHAVAARQMSGFGGMVSFRVRAGADAA
AEVCRRARLFTLAESLGGVESLIEHPGRMTHASAAGSPLAVPDDLVRLSVGIESADDLLADLRQALDAALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-61 44
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-62 44
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-40 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FraEuI1c_6724 YP_004020563.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 3e-50 44