Gene Information

Name : FraEuI1c_6666 (FraEuI1c_6666)
Accession : YP_004020506.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 8148889 - 8149653 bp
Length : 765 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mgi:Mflv_2501 short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGGCCGGAAACCAGGTCGGCAAGGTCGCGATCGTCACGGGCGCCGCGTCTGGCATCGGTCGGGCGTGTGCGACGCGCCT
GGCCCAGGACGGCGCCGCCGTCGCCGTCCTCGACCTCAACGAGGGGGACGCGAAAACGGTCGCCGACGAGATCCAGGCCG
CCGGCGGCGCCGCGCTGGCGGTGGCCGCCGACGTCGCGGACCCGGAAAGCGTGGCCCGGGCCCTGGCGGCGACCCGTGAC
CGGTTCGGCCCGGTCACCATCCTGGTGAACTCGGCCGGGAAGACCGGCACGAAGCGCTTCCTGGACATCACCCTGGAGCA
GTGGACCTCGGTGCTGACCGTGAACCTGACCGGCACGTTCCTGTGCTGCCAGGCGGTCGTCCCGGACATGGTCGAGGCCG
GCTGGGGACGGATCGTGAACATCTCGTCGTCCAGCGCCCAGGGCGGCCAGGCGCTCATGAGCCACTATGTCGCGTCCAAG
GGCGGCGTCATCGCCTTCACGAAGGCGCTGGCGCTGGAGCTCGGCCCGGCCGGGATCACGGTGAACACGATTCCGCCGGG
CTTCGTCGACACCCCGATGCTGCGCCGCGACGAGGCCCGTGGCCGCTGGGGCCCGAACACCGCCGACGACCTCATCGCGC
GGACTCCCGTGCGCCGGATGGGCCTGCCGGAGGACATCGCCGCGGCCTGCTCCTTCCTCACCTCCGAGGAGGCCAGCTAC
ATCACCGGCCAGGTCTTCGGCGTCAACGGCGGCCGCAACACCTGA

Protein sequence : 
MAGNQVGKVAIVTGAASGIGRACATRLAQDGAAVAVLDLNEGDAKTVADEIQAAGGAALAVAADVADPESVARALAATRD
RFGPVTILVNSAGKTGTKRFLDITLEQWTSVLTVNLTGTFLCCQAVVPDMVEAGWGRIVNISSSSAQGGQALMSHYVASK
GGVIAFTKALALELGPAGITVNTIPPGFVDTPMLRRDEARGRWGPNTADDLIARTPVRRMGLPEDIAAACSFLTSEEASY
ITGQVFGVNGGRNT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-28 44
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 4e-30 44
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 4e-28 44
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-28 44
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 2e-28 44