Gene Information

Name : FraEuI1c_4488 (FraEuI1c_4488)
Accession : YP_004018351.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Unknown
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 5491719 - 5492465 bp
Length : 747 bp
Strand : +
Note : KEGG: sco:SCO1070 two component system response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR

DNA sequence :
ATGAGCTCTGAACGCTCGATCGACACCGGCCGCCCAGGCGCGACGGACGACGAAGGCGACCCGCCGGCCTCGCCCATCCG
GGTGCTGATCGCGGACGACGAGGGGCTGGTCCGGGCCGGATTCCGCGCGCTCGTCGAGGCCACGCCCGACCTGACCGTCG
TCGCCGAGGCAGCCGACGGTGTCGCGGCGGTCCGCGAGTCCCGCCGGCTACGGCCGGACGTGGTGCTGATGGACATCCGG
ATGCCGGTCATGAACGGCCTGGAGGCCACCCGGCTGATCGCCGCCGACGCCGTTCGGCCCGGGCCCGGCATCCTGGTCGT
GACGACGTTCGACGACGACGAGTACGTCTTCGAGGCACTGCGCGCGGGCGCGGCCGGCTTCATCCTGAAGGACACCCAGC
CCGAGAACCTGCTGGCCGCGATCCGGACGGTCGCCGCCGGGGACGCGCTGCTCGCCCCCGGAGTCACCCGCCGGCTGATC
GCCGCGTTCGTCCGGGTACCCGCCCCGCCGGCCAGCCCCCTTACCGGGCTCGCGTCGACGCTCACCGATCGCGAGCGGGC
GGTACTCACCCAGATCGCGAACGGCTACTCCAACGCCGAGATCGCGCAGGCGCTCTACGTCAGCGTGTCCACGGTCAAGA
CCCACGTCGGCCACCTGCTGGCGAAGCTCGCCGCCCGCGACCGAGCCCAACTCGTCATCGCCGCCTACGAGTCCGGCCTG
GTCGCCCCCGGGAGCGCGACCGCCTGA

Protein sequence :
MSSERSIDTGRPGATDDEGDPPASPIRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIR
MPVMNGLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAAIRTVAAGDALLAPGVTRRLI
AAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAEIAQALYVSVSTVKTHVGHLLAKLAARDRAQLVIAAYESGL
VAPGSATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CD241_0088 YP_005124357.1 two-component system response regulator Not tested Not named Protein 6e-28 44
DIP0091 NP_938488.1 two-component system response regulator Not tested Not named Protein 2e-27 43
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 2e-31 42