Gene Information

Name : FraEuI1c_4417 (FraEuI1c_4417)
Accession : YP_004018283.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 5404276 - 5405070 bp
Length : 795 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: amr:AM1_B0303 oxidoreductase, short chain dehydrogenase/reductase family protein

DNA sequence : 
ATGCGTCTGAAGGACAAGGTCGCGGTCATCACGGGAGCGGGTTCGGGAATCGGCAAGGCGATAGCGCACCGGTTCGCGGC
CGAAGGGGCGAACGTCGTCTGCGCCAGCGTCAGCGGCCGGGCGGTCGAGGTCGCCGCCGAGATCGGCCCTGCGGCGGTCG
GGGTCCAGGCGGACGTCGGCGACGAGGCGGACGTCCGGCGGCTGATGACGACGGCGCGGGACGCGTTCGGCCGGATCGAC
GTCCTCGTGAACAACGCCGGGTTCGGCGGCAAGTTGAGGCCGTTACACGAGCAGACCACCGCGGACTGGGACCGCGTGCA
CGGGGTGAATCTCCGAGGTGTCTTCTTCTGCATGAAATACGGCATCATCGCGATGCGCGACGCCGGTGGCGGCGGCTCGA
TCGTCAACATCTCGTCGGCGACGGCGGTCGTCGGCTTCAAGAACCACGGGGTCTACGGGGCGGCCAAAGCCGGCGTGAAC
CAGCTGACGAAAGCCGCGGCCCTCGACTACGCCGACGACAACATCAGGGTGAACGCGGTCTGCCCCGGCACGATCTGGAC
CGGCCTCGTGGCGATGTCGAAGGTGTCGCCCGAGCCGCCGCCCGGGGTCTACCGCCTCCCGGGCATCCCGATGGACCGCT
GGGGCCTGTCGAACGAGGTCGCCGCGGCCGCCCTGTTCCTGGCGAGCGACGAGGCCTCGTACGTCACGGGCCTGCTGATG
CCCGTGGATGGCGGCTACTCCATCGGCTATTCCGGGATGGGCGCCGAGAAGACGGGCAAGCCCGCGGCTCCTTGA

Protein sequence : 
MRLKDKVAVITGAGSGIGKAIAHRFAAEGANVVCASVSGRAVEVAAEIGPAAVGVQADVGDEADVRRLMTTARDAFGRID
VLVNNAGFGGKLRPLHEQTTADWDRVHGVNLRGVFFCMKYGIIAMRDAGGGGSIVNISSATAVVGFKNHGVYGAAKAGVN
QLTKAAALDYADDNIRVNAVCPGTIWTGLVAMSKVSPEPPPGVYRLPGIPMDRWGLSNEVAAAALFLASDEASYVTGLLM
PVDGGYSIGYSGMGAEKTGKPAAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 1e-26 43
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 8e-25 43
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 6e-25 43
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 6e-25 43
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 4e-25 43