Gene Information

Name : FraEuI1c_4372 (FraEuI1c_4372)
Accession : YP_004018241.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5347088 - 5347858 bp
Length : 771 bp
Strand : -
Note : manually curated; PFAM: ABC transporter related; KEGG: tcu:Tcur_4659 ABC transporter related protein; SMART: AAA ATPase

DNA sequence : 
GTGAGCGTACGAGCGCGATTCCAGGAGACCGCGACGGAGCTGGCGTCCGCGCCTGTCGTCGAACTGCGTGGCGTAAGCCG
CATATATGGCCGTCGCCTCACGGAGGTGCGAGCCCTGGACGACGTGGACGTCGCGTTCTCGGCTGGCTCGTGGACGGCGG
TTATGGGGCCCTCGGGCTCCGGAAAGTCGACGTTGCTGCACTGCGCGGCCGGGCTTGAGAAGGTTACCGGCGGGCAGGTC
GTGCTTTCCGGCCAGGATATTACCGGCGCCTCCGACGCGGAGCTCACCGAATTGCGCCGGAGGACGGTGGGATTCGTCTT
CCAGAGTTTCAACCTGATTGGGTCGCTGACCGCGGAGCAGAACGTCGCCATGCCGCTGCGGCTGGCCGGCCAGCGCCCGG
GGCGGCGGGTGGTCCGGGAGGCGCTCGCCGCGGTCGGGCTGGCCGACCGGGCCCGGCACCGGCCGCGGGAGCTGTCCGGC
GGCCAGCAGCAGCGCGTCGCGATCGCGCGGGCCATGGTGACCAGGCCGGCAGTGCTGTTCGCCGACGAGCCGACGGGAGC
GCTGGACAGCCGGTCCGCGCGCGGCCTGCTCGACCTGCTGCGTTCCATGGTCGACGACGAGGGCCAGACCATCGTCATGG
TGACCCACGACCCCGCCGCCGCGGCGACCGCCGACCGCGTGCTCTTCCTGCGCGACGGGCGCCTGGTCGACCGGCTGGAA
CGGCCGTCAGCCCACGCGGTGGCCGACCTGCTGGCGAGCTGGGAATCGTGA

Protein sequence : 
MSVRARFQETATELASAPVVELRGVSRIYGRRLTEVRALDDVDVAFSAGSWTAVMGPSGSGKSTLLHCAAGLEKVTGGQV
VLSGQDITGASDAELTELRRRTVGFVFQSFNLIGSLTAEQNVAMPLRLAGQRPGRRVVREALAAVGLADRARHRPRELSG
GQQQRVAIARAMVTRPAVLFADEPTGALDSRSARGLLDLLRSMVDDEGQTIVMVTHDPAAAATADRVLFLRDGRLVDRLE
RPSAHAVADLLASWES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-42 49
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-45 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-45 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-45 47
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-29 41
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FraEuI1c_4372 YP_004018241.1 ABC transporter NC_008702.1.4606598. Protein 5e-40 49
FraEuI1c_4372 YP_004018241.1 ABC transporter CP001581.1.gene798.p Protein 3e-44 45
FraEuI1c_4372 YP_004018241.1 ABC transporter NC_012469.1.7686878. Protein 8e-44 44