|
Name : FraEuI1c_4339 (FraEuI1c_4339) Accession : YP_004018208.1 Strain : Frankia sp. EuI1c Genome accession: NC_014666 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 5310229 - 5311944 bp Length : 1716 bp Strand : - Note : KEGG: ace:Acel_0052 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC DNA sequence : ATGGAGCGTTCCGCTCACCCGACCCCCGTTTCCGTGCCCCTGCCGGGAAGCCGGCGGACCTATCTGACCGGGCCCGATGG GGGCCTGCGCGTCCCGATGCGGGAGGTGGCGCTGTCCAACGGCGACTCGGTGGTCCTCTACGACACCTCGGGGCCGTACA CCGACCCCGACGTGCTCGTCGACGTCCACCGAGGACTCGCCCCCACCCGCGCGGCCTGGATCGACGCCCGCGGCGACACG GCCGAGACCGGCGCTCGCCCGGCGCGCCGGGCGCTGCCCGGCCGGGCCGTCACCCAGCTCGGGTACGCCCGCCGCGGGGA GATCACCCGGGAGATGGAGTTCGTCGCCGTCCGGGAGGGGCTGGACCCCGCGTTCGTCCGCGCGGAGATCGCCGCCGGGC GGGCGGTGCTGCCGGCGAACGTCAACCATCCCGAGTCCGAGCCGATGGCGATCGGCCGCGACTTCCTTGTGAAGATCAAC GCCAACATCGGCAACTCGGCGGTCGCCTCCTCGATCGAGGAGGAGGTGGAGAAGATGGTCTGGGCGACCCGCTGGGGCGC GGACACCGTCATGGACCTCTCGACCGGCCGCGACATCCACACCACCCGGGAGTGGATCCTGCGGAACTCGCCGGTGCCGG TCGGGACCGTGCCGATCTACGAGGCGCTGGAGAAGGCCGGCGGGCGGGCCGAGGACCTGAGCTGGGAGCTGTACCGCGAC ACGGTGATCGAGCAGGCGGAGCAGGGCGTCGACTACATGACGGTCCATGCCGGCGTACTGCTGCGCCACGTCCCGCTGAC GGCGCACCGGCGCACCGGGATCGTCTCCCGCGGCGGGGCGATCCTGGCGGCCTGGTGCCTCGCGCATCACGAGGAGAACT TCCTCTACACCCACTTCGCGGAGCTGTGCGAGATCCTGCGCGGGTACGACGTCACCTTCTCCCTCGGCGACGGGCTGCGG CCCGGCTCGATCGCCGACGCGAACGACGCCGCCCAGCTGGCCGAGCTGGCGACCCTCGGGGAGCTGACGACGATCGCCTG GGAGCACGACGTCCAGGTCATGATCGAGGGGCCGGGCCACGTGCCGCTCCACAAGATCAAGGAGAACGTCGACCTGCAGC GCGAGCTGTGCCACGACGCGCCGTTCTACACGCTCGGTCCGCTGACCACCGACATCGCGCCGGGTTACGACCACATCACC TCCGCCATCGGCGCCGCGATGATCGGCTGGCATGGCACCGCGATGCTCTGTTACGTCACCCCCAAGGAGCATCTGGGTCT ACCGGACCGAGATGACGTCAAGGCGGGCGTCATCGCCTACAAGATCGCGGCACACGCCGCCGACCTCGCCAAGGGCCACC CGGGGGCGCAGTCCTGGGACGACGCCCTGTCGCAGGCCCGCTTCGACTTCCGCTGGACCGACCAGTTCCACCTGGCCCTC GATCCGGAGACCGCCCAGGCCTTCCACGACGAGACGCTGCCGGCCGCGCCCGCGAAATCCGCCCACTTCTGTTCGATGTG CGGGCCGCACTTCTGCTCGATGAAGATCACCCGTGACGTCCGGCGCCACGCGGACGAGCAGGGCCTCATCTCCGCCGACG CCGTCGAGGCGGGCCTGCGCGCCAAGGCCGCCGAGTTCACCGCCGCCGGCTCCCGCCTCTACCTGCCCGCCCCCGCCACC GCGGCCGGCCCGGCCCCGACGGAACCCCGAACCTGA Protein sequence : MERSAHPTPVSVPLPGSRRTYLTGPDGGLRVPMREVALSNGDSVVLYDTSGPYTDPDVLVDVHRGLAPTRAAWIDARGDT AETGARPARRALPGRAVTQLGYARRGEITREMEFVAVREGLDPAFVRAEIAAGRAVLPANVNHPESEPMAIGRDFLVKIN ANIGNSAVASSIEEEVEKMVWATRWGADTVMDLSTGRDIHTTREWILRNSPVPVGTVPIYEALEKAGGRAEDLSWELYRD TVIEQAEQGVDYMTVHAGVLLRHVPLTAHRRTGIVSRGGAILAAWCLAHHEENFLYTHFAELCEILRGYDVTFSLGDGLR PGSIADANDAAQLAELATLGELTTIAWEHDVQVMIEGPGHVPLHKIKENVDLQRELCHDAPFYTLGPLTTDIAPGYDHIT SAIGAAMIGWHGTAMLCYVTPKEHLGLPDRDDVKAGVIAYKIAAHAADLAKGHPGAQSWDDALSQARFDFRWTDQFHLAL DPETAQAFHDETLPAAPAKSAHFCSMCGPHFCSMKITRDVRRHADEQGLISADAVEAGLRAKAAEFTAAGSRLYLPAPAT AAGPAPTEPRT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 2e-173 | 61 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 2e-173 | 61 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 7e-161 | 61 |
