Gene Information

Name : FraEuI1c_3775 (FraEuI1c_3775)
Accession : YP_004017652.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4617948 - 4618676 bp
Length : 729 bp
Strand : +
Note : KEGG: cwo:Cwoe_0302 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGACCGCCCCCGAGCACGCTCCGGCCGTGACGCTCGCCGAGGCGCCCCTAGCCGGCCCTGGCGCGCTGCTGGCCGCCGT
CGAGGTGCGCAAGGCGTTCGGCGCGACGACGGCCCTGGCCGGGGCGAGCCTGCGCGTCGACGCCGGCGAGGTCGTCGCGC
TGATGGGGCCGAGTGGCTCCGGCAAGTCGACGCTGCTGCACTGCCTGGCCGGGATCGTCCGTCCGGACGCCGGCGAGGTC
CACTACGGCCCGCACCGCCTCTCGGCGCTGTCCGAGTCGGCCCGCAGCGCCCTGCGCCGCGGCGACTTCGGCTTCGTCTT
CCAGTTCGGACAGCTCGTCCCCGAGCTGACCTGCGCCGAGAACGTGGCCCTGCCGCTGCGCCTGGCCGGGGTGGGCCGGC
GGGATGCCCGTGCCCGGGCGCTGGCGGCCCTGGGCCGGCTCGGCGTCGAGGACGTCGCCGCGAAGCGGCCCGGCGAGGTC
TCCGGTGGCCAGGGGCAGCGTGTCGCGGTCGCCCGGGCGCTGGTGACCGAGCCGAAGGTCGTCTTCGCCGACGAGCCGAC
CGGGGCGCTGGACTCGCTCAACGGCGAGCAGGTGATGCGGCTGCTCACCGAGGCCGCGCGGGAGACGTCCGCCGCGGTCG
TGCTGGTCACCCACGAGTCCCGGGTCGCGGCCTACTCCGACCGGGAGGTCGTGCTGCGCGACGGCCGGACCACGGACGCC
GCCTCATGA

Protein sequence : 
MTAPEHAPAVTLAEAPLAGPGALLAAVEVRKAFGATTALAGASLRVDAGEVVALMGPSGSGKSTLLHCLAGIVRPDAGEV
HYGPHRLSALSESARSALRRGDFGFVFQFGQLVPELTCAENVALPLRLAGVGRRDARARALAALGRLGVEDVAAKRPGEV
SGGQGQRVAVARALVTEPKVVFADEPTGALDSLNGEQVMRLLTEAARETSAAVVLVTHESRVAAYSDREVVLRDGRTTDA
AS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-26 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-26 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FraEuI1c_3775 YP_004017652.1 ABC transporter NC_008702.1.4606598. Protein 4e-21 47
FraEuI1c_3775 YP_004017652.1 ABC transporter NC_012469.1.7686878. Protein 4e-27 44