Gene Information

Name : FraEuI1c_3466 (FraEuI1c_3466)
Accession : YP_004017345.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Unknown
Product : LacI family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1609
EC number : -
Position : 4275419 - 4276462 bp
Length : 1044 bp
Strand : -
Note : KEGG: ami:Amir_1860 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI

DNA sequence :
ATGACCGACGTCGCCCGGCTGGCCGGCGTGTCGCACCAGACGGTCTCGCGGGTGCTGAACGACCACCCGAACGTCAAGGA
GCAGACGCGGCTGCGAGTGCGCGCGGCGATGGAGCAACTCGGGTACCGGCCGAACCGGGCGGCCCGGGCGCTGGTCACCG
GCCGCTCCCACGTCGTCGGGATCGTCGCGCAGAACACGGCGCTGTACGGGCCGACGGCGGTGCTGACCGCCGTCGAGCGG
GCGGTGAGCGCGGACGGTTTCGCCGTCGGCGTGGCCAGCGTGCCGGTGCTCGACCGGTCCTCGATCGTCGACGCGGTCAC
CCGGCTGCTGGAGCAGCGGGTGGCCGGGATCGTGGTGATCGCGCCGGTCCGGTCGGCGAACGAGGCGCTGGACGACGTTC
CGGACGACCTGCCGCTGGTGGTCATCGACGGCGACCCGGCCCGCCCGCGGCGCCTGGTGACCGTCGACCAGCGGCTCGGA
GCCCGGCTGGCGACGCAGTGCCTGCTGGCGGCGGGGCACGAGACGGTCTGGCACGTGTCCGGGCCGCCGGACTGGTTCGA
CAGCGCCGAGCGGGTGGCCGGCTGGCGGCAGGCGCTGCTCGACGCCGGCGCCGAGATACCACCGGTCATCACCGCGAACT
GGTCGCTGGACTCCGGGTACGAGGCGGGGCAGCTGCTCGCGGGGATCCCGCGGGCGCGCGCGGTCTTCGCCGCCAACGAC
CATCTGGCGCTGGGCATCATGAAGGCGCTGCGCGAGGCCGGCCGGTCGGTGCCCCGCGACGTGAGCGTCGTGGGGTTCGA
CGACATCCCGGAGGCGGGCTACGTCAGCCCGGCGCTGACGACCGTCCGCCCGGACTTCGAGGCCGTCGCCGCCCAGGCCG
TTCACCTGCTGCGGGCCCAGATGGACGACCCGCCGGCGGGCGGGTTGCCGCGTCTCGCGCCGATCCCGCCCTGCCTGGTC
GAGCGCGAGAGCGTCGCCCCGCCGCGCCGCGCGGCCGGCGCGAGGCCGCGCGCCGCGGCGGCGCGGCGCCCCGGCGACCA
GTAG

Protein sequence :
MTDVARLAGVSHQTVSRVLNDHPNVKEQTRLRVRAAMEQLGYRPNRAARALVTGRSHVVGIVAQNTALYGPTAVLTAVER
AVSADGFAVGVASVPVLDRSSIVDAVTRLLEQRVAGIVVIAPVRSANEALDDVPDDLPLVVIDGDPARPRRLVTVDQRLG
ARLATQCLLAAGHETVWHVSGPPDWFDSAERVAGWRQALLDAGAEIPPVITANWSLDSGYEAGQLLAGIPRARAVFAAND
HLALGIMKALREAGRSVPRDVSVVGFDDIPEAGYVSPALTTVRPDFEAVAAQAVHLLRAQMDDPPAGGLPRLAPIPPCLV
ERESVAPPRRAAGARPRAAAARRPGDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0036 YP_001220775.1 LacI family transcriptional regulator Not tested chp/tomA region Protein 4e-43 44