Gene Information

Name : FraEuI1c_3085 (FraEuI1c_3085)
Accession : YP_004016978.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 3729792 - 3730637 bp
Length : 846 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: fal:FRAAL0345 ketoreductase

DNA sequence : 
GTGACGAGATCCGTGGTAATCGTGACCGGCGCGGCGTCCGGCATCGGCCGCGCCGCCGCCGAGCTCTACGCCGAACGCGG
CTACGGCGTCGTCGGCGTGGACCGGTACGAGGCCGGGCTGGAGAGCCTGGAGCGGCCGGGCGAGATCGCCACCCTCGTGG
GCGACGTGGCCGAGGAGAAGACGAACCTGGCCGCCGTCGAGCTGGCGATCAGCCGGTTCGGCCGGCTGGACGCGGCCGTG
CTCAACGCGGGCGGCGGCGGGACCGGCCCGCTGGAGTCCGACGGCTCCATCGAGCGGCTGGACCGTGTCCTGGCGGTGAA
CGTGCGCGGGGTGGCGCTCGGGGTCCGGGCCGTCGTCCCGGCCCTGCGGGCGGTCGGCGGCGGCTCGATCGTCGCGACGT
CGTCCATCTCGGGCCTGCGCGGCGACTCCGGCGGGATCTGGGGCTACAACGCGGCGAAGGCCGCGGTGATCAACCTCGTC
CGGTCCCTGGCGCTCGACTACGCGGCCGAGAACATCCGGATCAACAGCATCGCCCCCGGCTCGGCCATCACGGCGATGAC
GGCACCGCTGCTGGCCGACCCGGTGCTCGCGGCCGCGTTCAACCGCGAGGTGCCGCTGCAGCGCTTCTCCTCGGCCCGGG
AGCAGGCCGAGGTCATCTACTTCCTGACGTCGTCGGCGGCCTCGTTCGTCACCGGGGTCACGATCCCGGTCGACGGCGGG
CTGTCGGCGGCGACGCGGCTGCTGCCGACCCCGACCTACCCCGGCCAGGACCCGTTGGAGATCTTCACCGGCCGGGTGTT
CCGCGAGGCGGACGCGGACGACCCCGACGCCGCCTCGGCGCGCTGA

Protein sequence : 
MTRSVVIVTGAASGIGRAAAELYAERGYGVVGVDRYEAGLESLERPGEIATLVGDVAEEKTNLAAVELAISRFGRLDAAV
LNAGGGGTGPLESDGSIERLDRVLAVNVRGVALGVRAVVPALRAVGGGSIVATSSISGLRGDSGGIWGYNAAKAAVINLV
RSLALDYAAENIRINSIAPGSAITAMTAPLLADPVLAAAFNREVPLQRFSSAREQAEVIYFLTSSAASFVTGVTIPVDGG
LSAATRLLPTPTYPGQDPLEIFTGRVFREADADDPDAASAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 1e-13 42
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 4e-13 42
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 4e-13 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 3e-13 41
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 2e-13 41