Gene Information

Name : FraEuI1c_2671 (FraEuI1c_2671)
Accession : YP_004016574.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : R : General function prediction only
COG ID : COG4221
EC number : -
Position : 3251402 - 3252136 bp
Length : 735 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: msm:MSMEG_3515 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase

DNA sequence : 
GTGGGCGTGCTGGCCGAGAAGGTCGCGATCATCAGCGGGGCCGCCCGTGGGCAGGGGCTCGCGGAGGCCGAGCGCTTCGT
GGCCGAAGGCGCCCGCGTCGTGCTCGTCGACCGGCTGGCCGAGGCCGTCGAGGCTGCCGCCGGGCGGCTCGGGGACGCGG
CCCGGTTCGTCGCCGGCGACGTCGCGGACGAGCGGGCCTGGACCGACGCCGTGGCGCTGGCGACCGACCAGTTCGGCGGC
GTCGACATCCTCGTCAACAACGCCGGTGTCATGGTCAGCCGGTCGCTGGTCGACACCGACGAGGCGACCTTCCGCGACGT
CCTCGACACGAACCTCGTCGGCGCCTACCTCGGCATCCGGGCGGTCGTGCCGGCGATGCGGGCCCGGGGTGGTGGCGCCA
TCGTCAACACCGCGTCGGCCGCGGGCCTCAAGGCGATCCCGATGGGCTCGGCCTACGTCGCGTCCAAGTTCGGCCTACGC
GGCCTGTCCCGCGCGGCGGCGCTGGAGCTCGGCCGCCACCAGATCCGGGTCAACTGCGTCTGCCCGGGCCTGGTTCGCAC
CGAGATGGCGGCCGACCTGCTGCGCTACCACGAGAAGGAGGCGCTGGCGAACATCCCGCTGGGGATCGCCGCCGAGGCGA
CGGACGTCGCGGACCTCGTCCTGTTCCTGGTCAGCGACGCCGCTCGGGCGATCTCCGGGGGCGAGTACCTGATCGACGGC
GCCTCGATCGCCTGA

Protein sequence : 
MGVLAEKVAIISGAARGQGLAEAERFVAEGARVVLVDRLAEAVEAAAGRLGDAARFVAGDVADERAWTDAVALATDQFGG
VDILVNNAGVMVSRSLVDTDEATFRDVLDTNLVGAYLGIRAVVPAMRARGGGAIVNTASAAGLKAIPMGSAYVASKFGLR
GLSRAAALELGRHQIRVNCVCPGLVRTEMAADLLRYHEKEALANIPLGIAAEATDVADLVLFLVSDAARAISGGEYLIDG
ASIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 3e-27 42
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-27 42
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-27 42
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 8e-28 42
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 1e-28 42