Gene Information

Name : FraEuI1c_2398 (FraEuI1c_2398)
Accession : YP_004016307.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Unknown
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2946173 - 2946865 bp
Length : 693 bp
Strand : -
Note : KEGG: sna:Snas_5644 transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR

DNA sequence :
ATGACCTCGCCACCGCGGGTGGTCATCGTGGACGACCAGGCGCTGGTCCGCTCCGGCTTCCGCATGATCCTCGCCGCCGA
CGGGATCGACGTCGTCGCGGAGGCAGCGGACGGCGGGCAGGCCGTCGACGCGGTCCGCCGGACCTGCCCGGACGTCGTGT
TGATGGACATCCGGATGCCCGAGATGGACGGCCTGGAGGCCACCCGGCGGATCCTCGGCGGCCGGCCGATCGACGCCGCC
GCCGCCCCGCGCGTCATCATCCTCACCACGTTCGACCTCGACCGCTACGTCTACGCGGCGCTGACCGCCGGCGCCAGCGG
CTTCCTGCTCAAGGACGTCAGCCCCGAGCACCTGGTCGCGGCGGTCCGCCTGGTCCGGATGGGTGACGCGCTGCTCGCGC
CCGCCATCACCCGGCGCCTGGTCGAGCGCTTCGCCTCGCGGGACAGCGGCGCCGCCAGGCTGCACCGGGACCTGTCCGCG
CTCACCCCCCGTGAGCTGGAGGTCCTCGAGTTCCTGGCCCAGGGGCTGAGCAACGCCGAGCTCGCCGCGCGGTTCCAGCT
GAGCGAGGCGACCGTGAAGACCCACGTCGCCCGCATCCTGGCCAAGCTCCAGGTCCGCGACCGCGCCCAGGCCGTCATCG
TCGCCTACGAGACGGGCCTGATCACCCCGGGCGCCGGGCGGGCCGGCTCGTAG

Protein sequence :
MTSPPRVVIVDDQALVRSGFRMILAADGIDVVAEAADGGQAVDAVRRTCPDVVLMDIRMPEMDGLEATRRILGGRPIDAA
AAPRVIILTTFDLDRYVYAALTAGASGFLLKDVSPEHLVAAVRLVRMGDALLAPAITRRLVERFASRDSGAARLHRDLSA
LTPRELEVLEFLAQGLSNAELAARFQLSEATVKTHVARILAKLQVRDRAQAVIVAYETGLITPGAGRAGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 7e-31 45
CD241_0088 YP_005124357.1 two-component system response regulator Not tested Not named Protein 2e-31 42
DIP0091 NP_938488.1 two-component system response regulator Not tested Not named Protein 2e-31 42
narP YP_217238.1 transcriptional regulator NarP Not tested SPI-12 Protein 2e-25 41