Gene Information

Name : FraEuI1c_2021 (FraEuI1c_2021)
Accession : YP_004015941.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 2473667 - 2475406 bp
Length : 1740 bp
Strand : +
Note : KEGG: fal:FRAAL3863 ABC transport protein, ATPase component; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase

DNA sequence :
GTGACGGCGATCCTTCCCGAGACCGGCCTTTCCAAGGCCGCCGTGCCGGCCGATCCGTCAGGCCGCCCGCTGGTCGAGAT
CCGCGGCCTCGACGTCGGCTACGTCCGCCACCGCGAGGTCCGCCCGGCCGTCGTGGGGCTGGACCTGACGGTCCGGTCCG
GCGAGGTGGTCGCCGTCGTCGGCGAGTCCGGCTCGGGCAAGACCACCACCGCGAACGCCGTCATCGGCCTGCTGCCGGCC
AACGGGCGGATCACCGCGGGCTCGGCTGTCATCGACGGCGTCGAGACCGCCGGAGCCTCCGAGGGCACCCTGCGGACGCT
GCGGGGCTCCGTCGTCGGGCTCGTCCCGCAGGACCCGATGGTCGGCCTCAACCCGACCCGGCGGATCGGCGCGCAGATCG
CCGAGGCGGTCCGGCTGCGCGGGGTCCGCGGCCCACAGGTGGACGCCGAGGTGCTGGAGTTCCTCGGCCAGGCGGGCGTC
CCCGACCCCGCCGCGCGGGCCAGGCAGTACCCGCACGAGCTGTCCGGCGGCCTGCGCCAGCGGGTGCTGATCGCGATCGC
GCTCGCCGGGCGGCCCAAGCTGATCATCGCGGACGAGCCGACCAGCGCCCTCGACGTCACCGTCGAGCGCAGGATCCTCG
ACCACCTGACCGGCCTCGTCCGGGAGCAGGGCATCGCGCTGCTGCTCATCACCCACGACCTGGCCGTCGCCGCGGACCGG
GCCGATCGGGTGATCGTCATGCGGGATGGCCGGATCGTCGAGCAGGGCGAGCCGCGGACCATCCTCGTCACCCCGCGCGA
GGCATACACCCGGGCGCTCATCGCCGCCGCGCCGGGGCTCGCGCACGGCGGGCGGGTCGTGCCGCGCTTCGACGTGCGCG
GCCAGCCGGCACCGGAGCCGATCCTGGTCCTGACCGACGTCCGCAAGACGTTCCCGGCCCGGGAGACCCGCCGCGGCCAG
CGTGGCTTCAACGCGCTGGACGGCGTGTCGATCCAGGTGCCGCGCGGGCGGACCCACGCGCTGGTCGGCGAGTCCGGCTG
CGGGAAGACCACGACGCTGCGGATCGCGCTCGGCCTCGAGGCGCCGACCAGCGGCTCGATCGTGCTGGACGGCGCCGAGC
TCGGCGGCCTGTCCTGGGGCAGGCAGCGGCCGCTGCGGCGCAAGGCCCAGCTCGTGCACCAGAACCCGTTCGCCGCGCTC
GACCCGAAGTTCACGATCCGTCAGTCGATCACCGAGCCGCTGGTGGCGATGCGGATCGGCGACCGGCGCGGCAGGGACGC
GCGGGCCAGGGAGCTGCTGGACCAGGTGGCGCTGCCGGCGGCGTACCTCGACCGGCTGCCCACCGAGCTGTCCGGCGGCC
AGCGCCAGCGGGTCGCGATCGCCAGGGCGCTCGCGCCGAGCCCCGACCTGCTGATGCTCGACGAGCCGGTCAGCGCGCTC
GACGTCTCCGTGCAGGGGCAGATCCTGCGGCTGCTCACCGAGCTGCAGGCCGAGCTCGGCCTGTCCTACCTGTTCGTCTC
CCACGACCTGGCCGTCGTCGCGGAGATCTCCCACACGGTGTCGGTGATGAGCGGCGGGCGGGTCGTCGAGGAGGGCCCCG
TCGCCGAGGTGTTCACCAACCCGCGCAGCCCGCACACCCGCGAGCTCATCGACGCCATCCCCGGCCAACGCACCGCGGCC
CTGGCCCGGGACGCTCCGACGCCCGGCGCCGCATCAGTGCCGGCGACCGATGGCTCCTGA

Protein sequence :
MTAILPETGLSKAAVPADPSGRPLVEIRGLDVGYVRHREVRPAVVGLDLTVRSGEVVAVVGESGSGKTTTANAVIGLLPA
NGRITAGSAVIDGVETAGASEGTLRTLRGSVVGLVPQDPMVGLNPTRRIGAQIAEAVRLRGVRGPQVDAEVLEFLGQAGV
PDPAARARQYPHELSGGLRQRVLIAIALAGRPKLIIADEPTSALDVTVERRILDHLTGLVREQGIALLLITHDLAVAADR
ADRVIVMRDGRIVEQGEPRTILVTPREAYTRALIAAAPGLAHGGRVVPRFDVRGQPAPEPILVLTDVRKTFPARETRRGQ
RGFNALDGVSIQVPRGRTHALVGESGCGKTTTLRIALGLEAPTSGSIVLDGAELGGLSWGRQRPLRRKAQLVHQNPFAAL
DPKFTIRQSITEPLVAMRIGDRRGRDARARELLDQVALPAAYLDRLPTELSGGQRQRVAIARALAPSPDLLMLDEPVSAL
DVSVQGQILRLLTELQAELGLSYLFVSHDLAVVAEISHTVSVMSGGRVVEEGPVAEVFTNPRSPHTRELIDAIPGQRTAA
LARDAPTPGAASVPATDGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-110 49
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-66 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-66 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-66 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-66 43