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Name : FraEuI1c_1945 (FraEuI1c_1945) Accession : YP_004015865.1 Strain : Frankia sp. EuI1c Genome accession: NC_014666 Putative virulence/resistance : Unknown Product : Tex-like protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 2372511 - 2375144 bp Length : 2634 bp Strand : - Note : KEGG: fal:FRAAL0492 transcriptional accessory protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold DNA sequence : GTGACGACGACGTCCACCGTGCAGGTCGCCGCTGTGCCAACAGAGGCTGCCAGGAGGTCCATCGAGGGCCGGATCGCCGA CGAGCTCGGGGTGCGCGAGAACCAGGTCGTGGCGGCCGTCGGGCTGCTCGACGGCGGCTCGACCGTGCCGTTCATCGCGC GCTACCGCAAGGAGGTGACCGGCACCCTCGACGACACGCAGCTGCGCACGCTCGAGGAGCGGCTGCGCTACCTGCGGGAG CTGGAGGAGCGCCGGGCGGCGATCCTGGAGTCGATCCGCTCCCAGGGCAAGCTCGACGACGCGCTCGAGGCGCAGATCAA CGCCGCCGACTCGAAGGCCCGGCTGGAGGACATCTACCTCCCCTACAAGCCGAAGCGCCGTACGAAGGCCCAGATCGCCC GCGAGGCAGGTCTGGAGCCGCTGGCCGACGCGCTGCTGGGCGACCCGACGCTGGACCCGACGACGACCGCCGCCGGCTAC GCCGACGCGGAGAAGGGCGTCGCGGACGCGGCGGCCGCGCTCGACGGAGCCCGCGCGATCCTGGTCGAGCGGTTCGCCGA GGACGCCGACCTGATCGGCGAGCTGCGCGAACGGATGTGGGGCCGCGGCCGGGTGGTCTCCAAGGTCCGTGAGGGCAAGG AGGAGGCCGGCGCCAAGTTCTCGGACTACTTCGCCTTCGACGAGCCGTTCACCTCGCTGCCGTCGCACCGGGTGCTCGCG CTGCTGCGCGGCGAGAAGGAGGAGATCCTCGACCTGGATCTCGACCCGGAGCCCGAGGACGCGGACCCGACCGCCCCGGT GGTGCCGTCGGGCTACGAGACGGCGATCGCGGCCCGGTTCGGTGTCACCGACGCGGGCCGCCCGGCCGACCGCTGGCTGG GCGACACGGTCCGCTGGGCGTGGCGGACGCGCGTCCTGGTCCACCTCGGCATCGACCTGCGGCTGCGCCTGTTCCAGGCC GCCGAGGACGAGGCCGTCCGGGTCTTCGCCACGAACCTGCGCGATCTGCTGCTGGCCGCCCCCGCCGGCACTCGGGCGAC GATGGGCCTCGACCCTGGCTACCGGACCGGTGTCAAGGTCGCCGTCGTCGACGCCACCGGCAAGTGCGTCGCGACCGACA CGATCTACCCGCACGTGCCGGCCCGCCGGTGGGACGAGGCCCTGGTCAAGCTGCACAAGCTGTGCGCCGCGCACCAGGTG GAGCTGATCGCGATCGGCAACGGCACCGCCTCCCGGGAGACCGACAAGCTCGCCGAGGAGCTGGTCCGCGCGGCGAGCGA GCTGAAGCTCACCAAGATCGTCGTCTCCGAGGCCGGGGCCTCGGTGTACTCGGCCAGCGCCTTCGCCTCGAAGGAGCTGC CCGGGATGGACGTGTCGCTGCGCGGCGCCGTCTCGATCGCGCGCCGGCTGCAGGACCCGCTGGCCGAACTCGTGAAGATC GACCCGAAGTCGATCGGGGTCGGCCAGTACCAGCACGACCTCAGCGAGCTGAAGCTGTCCCGGTCGCTGGACGCCGTGGT CGAGGACGCCGTGAACGCCGTCGGGGTCGACGTGAACACCGCGTCGACGCCGCTGCTCACCCGGGTCTCCGGGATCGGGG CGACCCTCGCCGAGAACATCGTCGCCCACCGGGACGCGAAGGGGCCGTTCCGGACCAGGACCGCCCTGCGCGAGGTGCCA CGCCTGGGCCCGAAGGCGTTCGAGCAGTGCGCGGGCTTCCTGCGCATCCCCGACGGCGACGACCCGCTGGACGCCTCGTC CGTGCACCCCGAGTCCTACCCGGTGGTGCGCCGCATCCTGACCGCCACGAACGGCGACATCCGCGGGCTGATCGGGAACT CGACGGCGCTGCGGGCGGTGAAGGCGACCGACTTCGTGGACGAGACCTTCGGTCTGCCGACGGTGACCGACATCCTCGCC GAGCTGGAGAAGCCGGGCCGCGACCCGCGGCCGGCGTTCAAGACCGCCACCTTCGCCGACGGCGTCGACGAGATCTCCGA CCTGGTGGCCGGCATGGTGCTGGAGGGCGTGGTCACCAACGTGGCCGCGTTCGGCGCCTTCGTCGACGTCGGCGTCCACC AGGACGGCCTGGTGCACGTGTCGGCGATGTCCAAGACCTTCGTGCGCGACCCGCGCGAGGTGGCCAAGCCGGGCGACATC GTCAAGGTCAAGGTCCTCGACGTCGACGTGCCCCGCAAGCGCATCTCGCTGACCCTGCGCCTCGACGACGACGCGGCCAC CGGTGGCGGCGGTGGCGGCGGTGGCGGCCGTGAGGGACGTGCGCAACGGTCGGGCCCACGCGGCGGCGGCCAGGCGGCCG GCGGCCAACCGGGCGGCGGGCGGCCAGGCAGCCAGTCCGGCGGTAGCCAGAACGGCGGCGGCGCCGGCCAGGCAGGGGGC CGGGACGGCGGACGAGATGCTCGCGGCGCGGACAACCGCGGCCCACGGCGGGACGCCGGCACCCGCGGCGCCCCCGCCGA CGGACGTGGCGGCGGCGGCCAGCGCGGCGGCACGAGCCGCGGGAACGGCCAGCGCGGCGGACGGCCCGCTGCCCCGCCGA ACGGCGCGATCGCCGACGCGCTGCGTCGGGCCGGCCTGGTCGACGAGAACGGCAGGCCCCGCACCGGCAAGTAG Protein sequence : MTTTSTVQVAAVPTEAARRSIEGRIADELGVRENQVVAAVGLLDGGSTVPFIARYRKEVTGTLDDTQLRTLEERLRYLRE LEERRAAILESIRSQGKLDDALEAQINAADSKARLEDIYLPYKPKRRTKAQIAREAGLEPLADALLGDPTLDPTTTAAGY ADAEKGVADAAAALDGARAILVERFAEDADLIGELRERMWGRGRVVSKVREGKEEAGAKFSDYFAFDEPFTSLPSHRVLA LLRGEKEEILDLDLDPEPEDADPTAPVVPSGYETAIAARFGVTDAGRPADRWLGDTVRWAWRTRVLVHLGIDLRLRLFQA AEDEAVRVFATNLRDLLLAAPAGTRATMGLDPGYRTGVKVAVVDATGKCVATDTIYPHVPARRWDEALVKLHKLCAAHQV ELIAIGNGTASRETDKLAEELVRAASELKLTKIVVSEAGASVYSASAFASKELPGMDVSLRGAVSIARRLQDPLAELVKI DPKSIGVGQYQHDLSELKLSRSLDAVVEDAVNAVGVDVNTASTPLLTRVSGIGATLAENIVAHRDAKGPFRTRTALREVP RLGPKAFEQCAGFLRIPDGDDPLDASSVHPESYPVVRRILTATNGDIRGLIGNSTALRAVKATDFVDETFGLPTVTDILA ELEKPGRDPRPAFKTATFADGVDEISDLVAGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSKTFVRDPREVAKPGDI VKVKVLDVDVPRKRISLTLRLDDDAATGGGGGGGGGREGRAQRSGPRGGGQAAGGQPGGGRPGSQSGGSQNGGGAGQAGG RDGGRDARGADNRGPRRDAGTRGAPADGRGGGGQRGGTSRGNGQRGGRPAAPPNGAIADALRRAGLVDENGRPRTGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 2e-175 | 61 |
