Gene Information

Name : FraEuI1c_1750 (FraEuI1c_1750)
Accession : YP_004015676.1
Strain : Frankia sp. EuI1c
Genome accession: NC_014666
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 2156190 - 2157614 bp
Length : 1425 bp
Strand : -
Note : KEGG: fal:FRAAL5161 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp

DNA sequence : 
ATGTTCGCCAACGCCGACGAAGTACTCCGCTACATCAGGGACGAGAACGTCGAGTTCATCGACGTCCGTTTCTGCGACCT
GCCGGGGATCATGCAGCACTTCACGATTCCGACGGAGGTCTTCACGGAGTCGATCTTCACCGACGGCCTGATGTTCGACG
GGTCCTCCATCCGCGGTTTCCAGGCTATCCATGAGTCGGACATGCTGCTGTTGCCCGACCCCCGGACCGCTTTTCTCGAC
CCGTTCCGCGAGCACCGGACGCTCGCGATGACCTTCTTCATCCACGACCCGATCACCAAGGAGGAGTACTCCCGCGACCC
GCGCAACGTGGCCCGCAAGGCGGAGGCCTACCTGCGCGGCTCGGGAATCGCGGACACGGCCTACTTCGGGCCGGAGGCGG
AGTTCTACATCTTCGACGACATCCGCTACGAGTACACCCCGTACGGCTCGCTGCACCGGGTCGACTCGGTCGAGGCCGCC
TGGAACAGCGCGCGCAAGGAGGACGGCGGCAACCTGGGCTACAAGCCGCGCTACAAGGGCGGCTACTTCCCGGTGCCACC
GACCGACCACTTCACCGACCTGCGCTCCGAGATGGTGAAGACGCTGATGAAGGTCGGCATCACCGTCGAGATGCAGCACC
ACGAGGTGGGCACCGCGGGCCAGGCGGAGATCGACTTCCGGTTCGACACGCTGCTGAAGACCGCCGACAACCTGATGCTC
TACAAGTACGTGATCCGCAACGTCGCCCGCGACCGGGGCCGCACGGTCACGTTCATGCCGAAGCCGCTCTTCCAGGACAA
CGGCTCGGGCATGCACGTCCACCAGAGCCTCTGGAAGGACGACGGGCCGCTGTTCTACAGCCCCGAGGGCTACGGCGGCC
TGTCGGAGCTCGCCCGCCACTACATCGGCGGCCTGCTGCACCACGCCCCGGCGCTGCTGGCGTTCACGAACCCGACGACG
AACTCCTACCGGCGCCTCGTGCCCGGCTACGAGGCACCGGTGAACCTGGTCTACTCCGCCCGCAACCGGTCCGCGTGCTG
CCGGATCCCGCTGGGCGGCGACTCGCCGAAGGCGAAGCGGATCGAGTTCCGGGTGCCCGACCCGAGCTGCAACCCGTACC
TGGCGTTCTCCGCGATGCTGATGGCCGGGCTGGACGGGATCAAGAACAAGATCGAGCCGCGCGACCCGATCGACAAGGAC
CTCTACGAGCTGCCCCCGGACGAGCTCGCCTCCGTGCCGCAGGTTCCCGGCTCGCTGGAGGCGGTGCTGGAGCACCTGGA
GGAGGACAACGAGTTCCTCACCGCGGGCGACGTGTTCACCCCGGACCTGATCGAGACCTGGCTCGACTACAAGCGCACCA
ACGAGGTCGACGCCATCCGACTGCGTCCGCACCCGTTCGAGTTCGAGCTCTACTACGACATCTGA

Protein sequence : 
MFANADEVLRYIRDENVEFIDVRFCDLPGIMQHFTIPTEVFTESIFTDGLMFDGSSIRGFQAIHESDMLLLPDPRTAFLD
PFREHRTLAMTFFIHDPITKEEYSRDPRNVARKAEAYLRGSGIADTAYFGPEAEFYIFDDIRYEYTPYGSLHRVDSVEAA
WNSARKEDGGNLGYKPRYKGGYFPVPPTDHFTDLRSEMVKTLMKVGITVEMQHHEVGTAGQAEIDFRFDTLLKTADNLML
YKYVIRNVARDRGRTVTFMPKPLFQDNGSGMHVHQSLWKDDGPLFYSPEGYGGLSELARHYIGGLLHHAPALLAFTNPTT
NSYRRLVPGYEAPVNLVYSARNRSACCRIPLGGDSPKAKRIEFRVPDPSCNPYLAFSAMLMAGLDGIKNKIEPRDPIDKD
LYELPPDELASVPQVPGSLEAVLEHLEEDNEFLTAGDVFTPDLIETWLDYKRTNEVDAIRLRPHPFEFELYYDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-89 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FraEuI1c_1750 YP_004015676.1 glutamine synthetase, type I VFG1399 Protein 9e-159 66