Gene Information

Name : Rvan_0888 (Rvan_0888)
Accession : YP_004011263.1
Strain : Rhodomicrobium vannielii ATCC 17100
Genome accession: NC_014664
Putative virulence/resistance : Unknown
Product : L-lactate transport protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1620
EC number : -
Position : 989074 - 990747 bp
Length : 1674 bp
Strand : +
Note : KEGG: dac:Daci_3344 L-lactate permease; TIGRFAM: L-lactate transport; PFAM: L-lactate permease

DNA sequence :
ATGACAGTGTGGCAGCAGAATTACGATCCACTCGGCAATCTCTGGCTTTCGAGCCTTGTGGCCGCGATCCCGATCCTCTT
TTTCTTCCTCGCCCTCACCCGATTGCGCCTGAAAGGCTATCTCGCCGCCACCATCACCTTGCTCCTCGCCATCGGGATCG
CCATCGGCATGTATCGCATGCCCGTCGAATCGGCGGCGGCGGCTGGCGTATATGGCTTCCTGTACGGGCTCTGGCCCATC
GCCTGGATCATCATCGCGGCCGTGTTCCTCTACCGGGTGTCGGTGGAAACCGGCCAGTTCGACATCATCCGCCGCTCGAT
CCTCCACATCACCGAAGACCAGCGACTCCAGCTTCTGCTCGTCGGCTTCGCGTTCGGCGCCTTCCTTGAGGGTGCGGCCG
GTTTCGGCGCTCCCGTCGCGATCACGGCGGCGCTGCTCGTAGGGCTCGGCTTCCGCCCGCTTTATGCGGCGGGCCTTTGC
CTCATCGCCAACACCGCGCCAGTCGCGTTCGGCGCGATGGGTATCCCGATCATCGTTGCGGGACAGGTGTCCAATATCGA
TCCGTTCCTGATCGGCCAGATGGCAGGACGGCAGCTTCCGCTGCTGTCGATCATCATCCCCTTCTGGCTGATCCTCATCA
TGGATGGCGTGAGGGGCGTGCGCGAAACGTGGCCCGCCATCCTCGTATGCGGCATCTCGTTCGCCACCGTGCAGTTTCTG
ACAGCGAATTTCATCGGCCCGGAACTTCCCGACATCACCGCCGCGCTCGCCTCGCTCGTTTGCCTGTCGCTGTTCCTGAA
GGTCTGGCAGCCGCGAAACATCTTCCGCTTCGACGCGAAGGAAATCGCGGCGGATGGAGCCGTGCCCGTTCCCGTTCAGC
ATGAGCCGAACCAGCGCTATACGACCGGCCAGATCGTCAAGGCCTGGTCCCCGTTCCTGATCCTGACCGCCTTCGTCACC
TTGTGGAGCATCCCGCCGTTCAAGGCGCTGTTCGCGGCGAACGGCCCGCTCGTTACCACGATCATGTCGATCCACGTGCC
GTTCCTCGACATGCTCGTCGAGAAGATCCCGCCCGTCGTGGCGCAGCCGAAGCTGCTTGAAGCGGTTTACAAATTCAACT
GGCTCTCCGCGACCGGCACCGCCATCTTCCTCGCGGCCATCGCATCCATCCTTCTTCTCGGCATGAGGCCCGGCAAGGCC
ATCGCGACCTTCGGCGGCACCCTGAAAAGCCTCGCCATCCCGATCTATTCGATCGGCGTCGTCCTAGCCTTCGCGTTCGT
GGCCAATTTCTCGGGGCTCTCGACAACGCTCGCGCTGCTGCTCGCTCATACGGGGTCGGCGTTCACGTTCTTCTCGCCGT
TCCTCGGATGGCTGGGCGTGTTCGTGACGGGTTCGGATACCTCCTCGAATGCGCTGTTCGGCGCGCTTCAGGCCACGACC
GCGCATCAGATCGGCGTGAGCGACGTGCTTCTCGTCGCGGTGAACACGACCGGCGGCGTGACGGGCAAGATGATCTCGCC
GCAGTCCATCGCCATCGCCTGCGCGGCGGTGGGGCTCGTCGGCAAGGAATCGGACCTGTTCCGCTTCACGGTGAAGCATA
GTCTTGCGCTCGCGGCGCTCATCGGTGTCATTACCACCGTTCAAGCTTACGTGACGCCGTGGATGATCCCCTGA

Protein sequence :
MTVWQQNYDPLGNLWLSSLVAAIPILFFFLALTRLRLKGYLAATITLLLAIGIAIGMYRMPVESAAAAGVYGFLYGLWPI
AWIIIAAVFLYRVSVETGQFDIIRRSILHITEDQRLQLLLVGFAFGAFLEGAAGFGAPVAITAALLVGLGFRPLYAAGLC
LIANTAPVAFGAMGIPIIVAGQVSNIDPFLIGQMAGRQLPLLSIIIPFWLILIMDGVRGVRETWPAILVCGISFATVQFL
TANFIGPELPDITAALASLVCLSLFLKVWQPRNIFRFDAKEIAADGAVPVPVQHEPNQRYTTGQIVKAWSPFLILTAFVT
LWSIPPFKALFAANGPLVTTIMSIHVPFLDMLVEKIPPVVAQPKLLEAVYKFNWLSATGTAIFLAAIASILLLGMRPGKA
IATFGGTLKSLAIPIYSIGVVLAFAFVANFSGLSTTLALLLAHTGSAFTFFSPFLGWLGVFVTGSDTSSNALFGALQATT
AHQIGVSDVLLVAVNTTGGVTGKMISPQSIAIACAAVGLVGKESDLFRFTVKHSLALAALIGVITTVQAYVTPWMIP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcA CAE85240.1 GlcA protein, putative glycolate permease Not tested PAI V 536 Protein 1e-134 65