Gene Information

Name : Rvan_3553 (Rvan_3553)
Accession : YP_004013830.1
Strain : Rhodomicrobium vannielii ATCC 17100
Genome accession: NC_014664
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 3864460 - 3865296 bp
Length : 837 bp
Strand : +
Note : KEGG: rsq:Rsph17025_0748 ABC transporter; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence :
ATGACCGCGCTCGCTAATCCCGTCACGTTCCGGCTTGCCGCGCTTGAACTGGAAAGCGTCGGCCGCGCCTTCGATGTAGC
CGGCACAAAGTTCGACGCATTGCGCGACGTGTCGCTGACTGTGTGCGAGGGTGAATTTATCGCCTTTGTCGGCGCATCGG
GATGCGGGAAGTCGACGCTTCTCAAAGCGATCGTCGGTCTCGACCGCGGCTTTGAAGGAAGTATCAGGATCGATGGAAAG
CCCGTCGATGGCCCGAACCTTGACCGGAGCATCGTGTTTCAGGAGCACCGTCTCCTGCCATGGCTTACGGTCGAAGCCAA
TGTCGGCGCGGCGCTCAGGAGAAGCGGCCTTCCGTCCAGCGAGCGGAAACAGCGCGTGGCCGAACAGCTCGATCTCGTTG
GGCTTTCCAGCTTCGCGAAGGCATATCCGGCTCAGTTGTCCGGCGGGATGGCGCAGCGTGTCGCCATCGCACGAGCGCTC
GTGACGCGCCCGCGCTTTCTGCTTCTGGATGAGCCGCTCGGAGCGCTGGACGCACTGACCCGTCTCAGGCTTCAAGGCGA
GCTTGCCCGGCTCATTCGACACGAGGGCACCACGGCGCTGCTCGTGACGCACGATGTTGATGAAGCCGTCACCCTCGCCG
ACAGAATCGTCGTGATGAAACCGCATCCTGGGCGCGTCGCGCGGATCCTCGATGTTCCGCGCCATGCGATCCGCGACCGC
TCGTCTCCAGCCTTCCTGAGAGCGCGAGACGAGGTTCTGGGGCTGCTCGGTGTTCCGGGTTTCGTCGAGGAACCCGATGC
CCCCCGTGACCGCCCGGCCGAACTCCAGACGGCCTGA

Protein sequence :
MTALANPVTFRLAALELESVGRAFDVAGTKFDALRDVSLTVCEGEFIAFVGASGCGKSTLLKAIVGLDRGFEGSIRIDGK
PVDGPNLDRSIVFQEHRLLPWLTVEANVGAALRRSGLPSSERKQRVAEQLDLVGLSSFAKAYPAQLSGGMAQRVAIARAL
VTRPRFLLLDEPLGALDALTRLRLQGELARLIRHEGTTALLVTHDVDEAVTLADRIVVMKPHPGRVARILDVPRHAIRDR
SSPAFLRARDEVLGLLGVPGFVEEPDAPRDRPAELQTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-50 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rvan_3553 YP_004013830.1 ABC transporter NC_008702.1.4606598. Protein 5e-23 41