|
Name : Rvan_3346 (Rvan_3346) Accession : YP_004013630.1 Strain : Rhodomicrobium vannielii ATCC 17100 Genome accession: NC_014664 Putative virulence/resistance : Unknown Product : S-adenosylmethionine/tRNA-ribosyltransferase- isomerase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0809 EC number : - Position : 3643472 - 3644647 bp Length : 1176 bp Strand : + Note : KEGG: pzu:PHZ_c1403 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein DNA sequence : GTGTCCGGCAGGACGCGGGCGCTCATCTTTTATTTTGGCACCTGCCCACCCCTGGGCTTGCCGTTTCTTCGGCGACGCAT TGTGCACCTCACGGACTTCGACTTCGAGCTTCCCAAATCGGCGATCGCGCTCCGGCCCGCGAGCCCGCGCGACGCCGCGC GGTTGCTACGCGTCGATCCCGCCGCGCCGCAGCCGCTCTCCGAAGCCACGATCCGCGACCTTCCCGCCTTTTTCCGTCCC GGCGACATCATGGTGTTCAACGACACCCGCGTCCTGTCCGCCGAGCTGTCAGGCACCCGCCCGCCGCGCGATGCGGATGC GCCCGCGGTGGACGTCTCCCTGAACCTGATCGAACGTGAAGCGTCCGGCTCGTGGAAAGCCTTTGCGCGGCCCGCGCGGC GGCTACGGCCGGGCGACGCGATCCACTTCGAGACAGGCGGACACGCGTCCCGGCTGATCGTTGTCGCCAAGTCCGACGAG GGCGAAATCACCCTCGCCGCGCCAGACGGCGACAGCGTCGAGGCCATCATGCAGCGCCACGGCGCGATGCCGCTCCCGCC CTATATCGCCCGCCAGCGCCCCGCCGACGAACGCGACCGCTCGGACTATCAAACCGTTTTCGCGCGCAACGAAGGAGCCG TCGCCGCGCCTACGGCCGGGCTCCACTTCACGCCGGAGCTTCTCGCGCGGCTTGCCGAACGCGGCATAGAGACCGCCTTC GTCACGCTCCACGTGGGCGCGGGCACCTTCCTGCCGGTGAAGTCGGAGACGGTCGAGGATCACGAAATCCATGCAGAGTG GTTCGAGATCGGCGACGCAACGGCGCGCGCCATCAACGCGGCGCGCGAGCGCGGCGGCCGCATTATTGCCGCCGGCACGA CCTCGCTACGTGTACTTGAGACGGCCACGCGCGAAGACGGCTTTATTGAGCCCGCCAAAGGCTTTACAAGGATCTTCATC AAGCCCGGCCACTGTTTCAGAAGCGCGGACCTCCTCGTGACGAATTTCCATCTGCCGAAATCGACGCTGTTCATGCTCGT CTGCGCCTTCTCCGGCACCGACCTCATGAAGCGCGCCTACGCCCACGCCGTCGAAGCGGGCTTCCGCTTCTATTCCTACG GCGACGCGTGCCTTCTCGCGCGTGCGGACGCGCAGCCCTCGACGGCCCGCCCATGA Protein sequence : MSGRTRALIFYFGTCPPLGLPFLRRRIVHLTDFDFELPKSAIALRPASPRDAARLLRVDPAAPQPLSEATIRDLPAFFRP GDIMVFNDTRVLSAELSGTRPPRDADAPAVDVSLNLIEREASGSWKAFARPARRLRPGDAIHFETGGHASRLIVVAKSDE GEITLAAPDGDSVEAIMQRHGAMPLPPYIARQRPADERDRSDYQTVFARNEGAVAAPTAGLHFTPELLARLAERGIETAF VTLHVGAGTFLPVKSETVEDHEIHAEWFEIGDATARAINAARERGGRIIAAGTTSLRVLETATREDGFIEPAKGFTRIFI KPGHCFRSADLLVTNFHLPKSTLFMLVCAFSGTDLMKRAYAHAVEAGFRFYSYGDACLLARADAQPSTARP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| queA | AAF71483.1 | QueA | Not tested | Hrp PAI | Protein | 2e-57 | 47 |
| queA | AAT96122.1 | QueA | Not tested | T-PAI | Protein | 7e-59 | 47 |
| queA | AAT96042.1 | QueA | Not tested | T-PAI | Protein | 2e-55 | 47 |
| queA | AAF71490.1 | QueA | Not tested | Hrp PAI | Protein | 7e-55 | 46 |
| queA | AAT96182.1 | QueA | Not tested | T-PAI | Protein | 5e-55 | 46 |
| queA | AAT96070.1 | QueA | Not tested | T-PAI | Protein | 2e-55 | 46 |
| queA | AAT96106.1 | QueA | Not tested | T-PAI | Protein | 1e-55 | 46 |
