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Name : Rvan_3283 (Rvan_3283) Accession : YP_004013573.1 Strain : Rhodomicrobium vannielii ATCC 17100 Genome accession: NC_014664 Putative virulence/resistance : Resistance Product : winged helix family two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 3573926 - 3574612 bp Length : 687 bp Strand : - Note : KEGG: rpt:Rpal_3409 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver DNA sequence : ATGACGGTTGCCGATCGCACTCTCGTGCTTGTTGTGGAGGACGAGCCTCAAATCAGGCGGCTCCTGCGCACGAGTCTGGG AGCCAACGGATTTGCCGTCGTTGAAGCGATCAACGGCAAGGCGGCGTTTGAGGCGATCACGCGCGAGCGGCCCGAAGTCA TCCTCCTCGACCTCGGACTGCCCGACATGGACGGCCTTGCGATCATCGAAACGCTGCGAAGCTCGGGCGACAAAACGCCG ATCGTGGTTCTTTCGAGCCGCGGCGAGGAAGCAACCAAGGTCGAAGCGCTGGATCTCGGCGCTGACGACTACGTCACGAA GCCGTTCGGCGTGGCCGAGCTGATCGCGCGGCTGCGCACGTCGCTGCGCCATCGCGTTCAGGCTGAGGGCGGCGAGCCGG TGTTCGAAAGCGGCGACCTACGCATCGACCTCGTGCATCGCCGCGTGACGCGTTCAGGCAGCGACGTGAAGCTGTCGCCA AAGGAATACGACATCCTGCGCCTTCTCGCGCTGCATGCCGGGAAAGTTCTGACGCACAAATTCATTATGGCCGAGCTTTG GGGCGCCAACGCCGATGTGCAGTATTTGCGCATCTATGTGCGCCAGCTTCGCGCGAAGATCGAAGCGCACTCCGAGAGCC CTCAGCACATCATTACAGAAACCGGCGTCGGCTATCGTTTGAAGTAG Protein sequence : MTVADRTLVLVVEDEPQIRRLLRTSLGANGFAVVEAINGKAAFEAITRERPEVILLDLGLPDMDGLAIIETLRSSGDKTP IVVLSSRGEEATKVEALDLGADDYVTKPFGVAELIARLRTSLRHRVQAEGGEPVFESGDLRIDLVHRRVTRSGSDVKLSP KEYDILRLLALHAGKVLTHKFIMAELWGANADVQYLRIYVRQLRAKIEAHSESPQHIITETGVGYRLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 8e-27 | 42 |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 5e-33 | 42 |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 3e-33 | 42 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 2e-26 | 41 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 1e-26 | 41 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 2e-26 | 41 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 2e-26 | 41 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 2e-26 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rvan_3283 | YP_004013573.1 | winged helix family two component transcriptional regulator | BAC0111 | Protein | 5e-28 | 41 |
