Gene Information

Name : Rvan_3177 (Rvan_3177)
Accession : YP_004013472.1
Strain : Rhodomicrobium vannielii ATCC 17100
Genome accession: NC_014664
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 3458326 - 3459933 bp
Length : 1608 bp
Strand : -
Note : KEGG: bja:bll2159 transposase

DNA sequence :
ATGATTGCAGCTACGGATCAGCTCCCTGACGATATCGGCGTCCTGAAAGCTCTGGTGGCGCACTGGGCGGAACAAGCGTC
GGCGAAAGACGCAGCGCTCGCCGAAAAGGACGCCGAACTGGCCCGCGTTCAGGGCGCCAATGCGAGATTGTGGGAGACGC
TGCGCCAGCTGCGTCGCGCGCAGTTCGGCCGCAAATCGGAGAAGCTCGATCCCGATCAGTTGAGCCTCGCCATGGAGGAG
ACCGAGCAGGCGATCGCCGAAACGGGTGCCACGGATGAGACCTCGAACGCGACGCTGAAAGCGTCGCGCAAAGGACCCCG
CTCTGTCAATCGCGGGGCGCTGCCCTCCCATCTGCCGCGGGAGGAGATCGTCATCGAACCGGAAAGCACAGCTTGTCCGT
GTTGTGGCGGTGCCATGCATGTCATGGGCGAGGATCGCTCGGAGCGGCTGGACGTGATCCCGGCCCAGTTCAAAGTGATC
GTGACGCGCCGGCCGAAATATGCCTGCCGGGCCTGCGAAGGCGCTGTGGTTCAGGCTCGGGCGCCAACGCGTCTGATCGA
GGCCGGCATCCCGACCGAGGCACTGGTCGCTCACGTTCTGACCGCGAAATATGCCGATCACTGTCCGCTGTATCGGCAGG
CGCAAATCTATCGCCGCCAGGGCGTCGATCTCGATCGCTCCACGCTCGCTGACTGGGTCGGCAAAGCGGCGGCGCTTCTG
GCGCCGCTTCAGACGCGCCTGTTCGAGATCCTGAAAACCTCGCCGAAACTGTTCGCCGACGAGACGCGCTGCCCCGTCCT
GGATCCGGGACGAAAGCGCGTGAAGCTCGGCCAGCTCTGGGCTTACGCCCGCGACGACAGGCCCTGGGGCGGCTCCGATC
CGCCCGCCGTTGTCTACTGCTATGCGCCAGGCCGCGGATCGGAGCATGTGAAAAGCCATCTCGCAGGCTTCAGCGGGATC
CTGCAGGTCGATGGCTATAGCGCCTACAAGGACCTCGCGAGCAACCGGCCAGCGTCGGCACCGCTCATCCTGTCCTTCTG
CTGGACGCACCTGAGGAGGCGGTTCTATGAAATCGCTGTGGGCGGCAACGCGCCGCTCGCCGACGCCGCGCTCGCGCAGA
TCGCAGCGCTTTACAAAATCGAGGAAACCATCCGTGGCCAGAGCGCCGAAGCGCGCCGCAAGGTCCGACAGGCCAAGAGC
ATGCCGCTACTCGATCGTTTCAAGTCCTGGTTTGAAAAGACCCTCTCCCTCGTTCCCGGCGGCTCCAAAATGGCCAAGGC
CATCCGCTATGCTCTCCACCATTGGGACGGCCTCATCCTGTTCGCGAACGACGGGCGCATCGAGATGGACACCAACACCG
TCGAGCGTTCCATCAGGCCCTTGGCTCTGAACAGGAAAAACGCACTCTTCGCCGGCCACGACCGCGGAGCAGAGCATTGG
GGAATCGTCGCTTCGCTCATTGAAACGGCCAAACTCAATGGCGTCGATCCACAGGCCTGGCTCGCCAGCATTCTCTCACG
CCTCGTCAATGGCTGGCCGATGCGCAAAATCGATGAACTCATGCCCTGGGCCTTTGCCGTTCACCAAAAGGCTGCTCCCG
TGGTCTGA

Protein sequence :
MIAATDQLPDDIGVLKALVAHWAEQASAKDAALAEKDAELARVQGANARLWETLRQLRRAQFGRKSEKLDPDQLSLAMEE
TEQAIAETGATDETSNATLKASRKGPRSVNRGALPSHLPREEIVIEPESTACPCCGGAMHVMGEDRSERLDVIPAQFKVI
VTRRPKYACRACEGAVVQARAPTRLIEAGIPTEALVAHVLTAKYADHCPLYRQAQIYRRQGVDLDRSTLADWVGKAAALL
APLQTRLFEILKTSPKLFADETRCPVLDPGRKRVKLGQLWAYARDDRPWGGSDPPAVVYCYAPGRGSEHVKSHLAGFSGI
LQVDGYSAYKDLASNRPASAPLILSFCWTHLRRRFYEIAVGGNAPLADAALAQIAALYKIEETIRGQSAEARRKVRQAKS
MPLLDRFKSWFEKTLSLVPGGSKMAKAIRYALHHWDGLILFANDGRIEMDTNTVERSIRPLALNRKNALFAGHDRGAEHW
GIVASLIETAKLNGVDPQAWLASILSRLVNGWPMRKIDELMPWAFAVHQKAAPVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 5e-91 43
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 3e-85 42
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 8e-85 42
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-85 42
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 8e-85 42
unnamed AAC31494.1 L0015 Not tested LEE Protein 9e-86 42
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 4e-85 42
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-85 42
tnp AEA34686.1 transposase Not tested Not named Protein 2e-86 42
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-85 42
unnamed AAL57570.1 unknown Not tested LEE Protein 1e-85 42
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 9e-86 42
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 6e-83 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rvan_3177 YP_004013472.1 transposase VFG0793 Protein 5e-86 42